RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 SERINC2Q96SA4 455 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 LPIN3Q9BQK8 851 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 PRDM6Q9NQX0 595 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 PFDN2Q9UHV9 154 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 ATP11BQ9Y2G3 1177 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 NCOR1O75376 2440 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 GOLGA8IPA6NC78 632 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 MYMKA6NI61 221 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 GNA14O95837 355 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 HMOX2P30519 316 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 PRKAR1BP31321 381 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 SCTRP47872 440 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 CETN1Q12798 172 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 ECM1Q16610 540 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 RNF220Q5VTB9 566 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 TMEM214Q6NUQ4 689 aaKnown RBP13.24□□□□□ -0.29
DDX55-206ENST00000539934 KCNK18Q7Z418 384 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 CPXCR1Q8N123 301 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 ABTB1Q969K4 478 aaPredicted RBP13.24□□□□□ -0.29
DDX55-206ENST00000539934 NELL2Q99435 816 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 EPN3Q9H201 632 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 TTYH1Q9H313 450 aaPredicted RBP13.24□□□□□ -0.29
DDX55-206ENST00000539934 SEPT11Q9NVA2 429 aaKnown RBP13.24□□□□□ -0.29
DDX55-206ENST00000539934 INTS13Q9NVM9 706 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 MORF4L1Q9UBU8 362 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 KIAA1024Q9UPX6 916 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 IVNS1ABPQ9Y6Y0 642 aa13.24□□□□□ -0.29
DDX55-206ENST00000539934 POTEB3A0JP26 581 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 TRIM49BA6NDI0 452 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 MSH4O15457 936 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 NCK2O43639 380 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 GBP1P32455 592 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 MTHFRP42898 656 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 ADARP55265 1226 aaKnown RBP13.23□□□□□ -0.29
DDX55-206ENST00000539934 BACE1P56817 501 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 ERVK-9P63128 1117 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 ERVK-24P63145 666 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 SPAG1Q07617 926 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 MCL1Q07820 350 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 PSMD6Q15008 389 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 IGSF11Q5DX21 431 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 HYIQ5T013 277 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 ARMCX5Q6P1M9 558 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 POTEBQ6S5H4 581 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 UNC13DQ70J99 1090 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 HACE1Q8IYU2 909 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 BCL7CQ8WUZ0 217 aaPredicted RBP13.23□□□□□ -0.29
DDX55-206ENST00000539934 TSGA13Q96PP4 275 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 TTC1Q99614 292 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 NDST4Q9H3R1 872 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 SEMA6BQ9H3T3 888 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 PLCB1Q9NQ66 1216 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 EMILIN3Q9NT22 766 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 CHD9Q3L8U1 2897 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 LOC285556D6RIA3 1793 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 A0A1B0GTH6 734 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 CFAP73A6NFT4 308 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 ADAMTS4O75173 837 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 RGS20O76081 388 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 PPP1R2P41236 205 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 TMED10P49755 219 aaKnown RBP13.23□□□□□ -0.29
DDX55-206ENST00000539934 ZNF268Q14587 947 aaPredicted RBP13.23□□□□□ -0.29
DDX55-206ENST00000539934 METTL21CQ5VZV1 264 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 TMEM154Q6P9G4 183 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 CYP2W1Q8TAV3 490 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 ZNF473Q8WTR7 871 aaKnown RBP13.23□□□□□ -0.29
DDX55-206ENST00000539934 NXPE3Q969Y0 559 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 FERD3LQ96RJ6 166 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 WDR18Q9BV38 432 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 CNGB3Q9NQW8 809 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 BMP2KQ9NSY1 1161 aaPredicted RBP13.23□□□□□ -0.29
DDX55-206ENST00000539934 THAP1Q9NVV9 213 aa13.23□□□□□ -0.29
DDX55-206ENST00000539934 AGO2Q9UKV8 859 aaKnown RBP13.23□□□□□ -0.29
DDX55-206ENST00000539934 PARP14Q460N5 1801 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 BDP1A6H8Y1 2624 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 TRAV6A0A075B6T7 132 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 PVALEFA0A1B0GWK0 134 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 KRBA1A5PL33 1030 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 EXTL3O43909 919 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 FKBP9O95302 570 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 FCER1AP12319 257 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 MZF1P28698 734 aaPredicted RBP13.22□□□□□ -0.29
DDX55-206ENST00000539934 STK4Q13043 487 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 NR1I3Q14994 352 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 MYLK3Q32MK0 819 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 TMEM259Q4ZIN3 620 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 FOXB2Q5VYV0 432 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 SPECC1LQ69YQ0 1117 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 VASH1Q7L8A9 365 aaPredicted RBP13.22□□□□□ -0.29
DDX55-206ENST00000539934 AGAP11Q8TF27 550 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 SHCBP1LQ9BZQ2 653 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 SLC38A10Q9HBR0 1119 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 RAVER2Q9HCJ3 691 aaKnown RBP13.22□□□□□ -0.29
DDX55-206ENST00000539934 PRKAG2Q9UGJ0 569 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 TELO2Q9Y4R8 837 aa13.22□□□□□ -0.29
DDX55-206ENST00000539934 IGLV3-22A0A075B6J6 115 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 CARNS1A5YM72 827 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 E7ENQ6 273 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 MED24O75448 989 aa13.21□□□□□ -0.29
DDX55-206ENST00000539934 XRCC5P13010 732 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms