RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 TFDP1Q14186 410 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 ACTL9Q8TC94 416 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 HSPH1Q92598 858 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 ACO2Q99798 780 aaKnown RBP14.82□□□□□ -0.04
UBE3B-210ENST00000539599 SMYD3Q9H7B4 428 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 NOD2Q9HC29 1040 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 METTL5Q9NRN9 209 aaKnown RBP14.82□□□□□ -0.04
UBE3B-210ENST00000539599 AGTPBP1Q9UPW5 1226 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 CHUKO15111 745 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 CST8O60676 142 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 PIGRP01833 764 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 RPSAP08865 295 aaKnown RBP14.82□□□□□ -0.04
UBE3B-210ENST00000539599 GHRP10912 638 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 MAN1A1P33908 653 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 GPX6P59796 221 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 MMRN1Q13201 1228 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 VGLL4Q14135 290 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 OASLQ15646 514 aaKnown RBP14.82□□□□□ -0.04
UBE3B-210ENST00000539599 WDR78Q5VTH9 848 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 GADL1Q6ZQY3 521 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 SYDE1Q6ZW31 735 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-210ENST00000539599 FBXO16Q8IX29 292 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-210ENST00000539599 TMEM237Q96Q45 408 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 MAK16Q9BXY0 300 aaKnown RBP14.82□□□□□ -0.04
UBE3B-210ENST00000539599 NIF3L1Q9GZT8 377 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 NKIRAS1Q9NYS0 192 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 CNTN6Q9UQ52 1028 aa14.82□□□□□ -0.04
UBE3B-210ENST00000539599 ZBTB42B2RXF5 422 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 LRCH4O75427 683 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 NFICP08651 508 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 EAPPQ56P03 285 aaPredicted RBP14.81□□□□□ -0.04
UBE3B-210ENST00000539599 TRIM72Q6ZMU5 477 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.81□□□□□ -0.04
UBE3B-210ENST00000539599 TRABD2AQ86V40 505 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 UNC45BQ8IWX7 931 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 UBA3Q8TBC4 463 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 NIFKQ9BYG3 293 aaKnown RBP14.81□□□□□ -0.04
UBE3B-210ENST00000539599 XYLT2Q9H1B5 865 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 TRABDQ9H4I3 376 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 C3orf70A6NLC5 250 aaPredicted RBP14.81□□□□□ -0.04
UBE3B-210ENST00000539599 ABLIM1O14639 778 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 MGRN1O60291 552 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 ECM2O94769 699 aaPredicted RBP14.81□□□□□ -0.04
UBE3B-210ENST00000539599 TJP3O95049 919 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 LDHAP00338 332 aaKnown RBP14.81□□□□□ -0.04
UBE3B-210ENST00000539599 ERBB2P04626 1255 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 OAZ1P54368 228 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 PPP1R15BQ5SWA1 713 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 RNASEH2BQ5TBB1 312 aaKnown RBP14.81□□□□□ -0.04
UBE3B-210ENST00000539599 RCOR2Q8IZ40 523 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 STAMBPL1Q96FJ0 436 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 C12orf42Q96LP6 360 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 HOXC10Q9NYD6 342 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 MCM3APO60318 1980 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 CLUHO75153 1309 aa14.81□□□□□ -0.04
UBE3B-210ENST00000539599 IGKV6D-21A0A0A0MT36 114 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 H0YCG3 227 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 TOM1L1O75674 476 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 SUN1O94901 812 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 CTCFP49711 727 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-210ENST00000539599 VCPP55072 806 aaKnown RBP14.8□□□□□ -0.04
UBE3B-210ENST00000539599 PSMC1P62191 440 aaKnown RBP14.8□□□□□ -0.04
UBE3B-210ENST00000539599 LACTBP83111 547 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-210ENST00000539599 CDO1Q16878 200 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 TFDP3Q5H9I0 405 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 SWT1Q5T5J6 900 aaKnown RBP14.8□□□□□ -0.04
UBE3B-210ENST00000539599 TMEM35BQ8NCS4 154 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 MRPL4Q9BYD3 311 aaKnown RBP14.8□□□□□ -0.04
UBE3B-210ENST00000539599 PITPNM3Q9BZ71 974 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 CXCL16Q9H2A7 254 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 PDGFCQ9NRA1 345 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 LGALS13Q9UHV8 139 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 EVPLQ92817 2033 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 FAM47DPA6NHR8 397 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 MAFO75444 373 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-210ENST00000539599 TMEM63AO94886 807 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 CDC25CP30307 473 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 DUOXA2Q1HG44 320 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 CROCCP2Q86T23 111 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 ZC3H18Q86VM9 953 aaKnown RBP14.8□□□□□ -0.04
UBE3B-210ENST00000539599 WDR49Q8IV35 697 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 FAM71DQ8N9W8 422 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 CPB2Q96IY4 423 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 RBM41Q96IZ5 413 aaKnown RBP14.8□□□□□ -0.04
UBE3B-210ENST00000539599 VCPIP1Q96JH7 1222 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 LBHD1Q9BQE6 289 aaPredicted RBP14.8□□□□□ -0.04
UBE3B-210ENST00000539599 CPSF3Q9UKF6 684 aaKnown RBP14.8□□□□□ -0.04
UBE3B-210ENST00000539599 NUMBLQ9Y6R0 609 aa14.8□□□□□ -0.04
UBE3B-210ENST00000539599 AVILO75366 819 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 KRT3P12035 628 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 CA4P22748 312 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 RDXP35241 583 aaKnown RBP14.79□□□□□ -0.04
UBE3B-210ENST00000539599 SLC25A11Q02978 314 aaKnown RBP14.79□□□□□ -0.04
UBE3B-210ENST00000539599 CAV1Q03135 178 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 OVGP1Q12889 678 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 STAT4Q14765 748 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 IGDCC3Q8IVU1 814 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 KLHL29Q96CT2 875 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 CLMNQ96JQ2 1002 aa14.79□□□□□ -0.04
UBE3B-210ENST00000539599 CALN1Q9BXU9 219 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms