RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 TAF3Q5VWG9 929 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 E4F1Q66K89 784 aaPredicted RBP10.72□□□□□ -0.69
LDHA-216ENST00000538451 OVOS1Q6IE37 1185 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 KIAA1841Q6NSI8 718 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 ZNF662Q6ZS27 426 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 LIMS2Q7Z4I7 341 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 NOP9Q86U38 636 aaKnown RBP10.72□□□□□ -0.69
LDHA-216ENST00000538451 DCP1BQ8IZD4 617 aaKnown RBP10.72□□□□□ -0.69
LDHA-216ENST00000538451 CCAR2Q8N163 923 aaKnown RBP10.72□□□□□ -0.69
LDHA-216ENST00000538451 CRYBG2Q8N1P7 616 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 FIBCD1Q8N539 461 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 UBE2Q2Q8WVN8 375 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 ZNF689Q96CS4 500 aaPredicted RBP10.72□□□□□ -0.69
LDHA-216ENST00000538451 TMEM169Q96HH4 297 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 VCPIP1Q96JH7 1222 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 ACBD6Q9BR61 282 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 LHX5Q9H2C1 402 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 SPTLC3Q9NUV7 552 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 MYO1AQ9UBC5 1043 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 LCMT1Q9UIC8 334 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 NOCTQ9UK39 431 aaKnown RBP10.72□□□□□ -0.69
LDHA-216ENST00000538451 STRIP2Q9ULQ0 834 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 PYCARDQ9ULZ3 195 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 PCDHGC3Q9UN70 934 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 L1RE1Q9UN81 338 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 SSX2IPQ9Y2D8 614 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 TRIOBPQ9H2D6 2365 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 MICAL3Q7RTP6 2002 aa10.72□□□□□ -0.69
LDHA-216ENST00000538451 ANKRD62A6NC57 917 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 GABRDO14764 452 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 SPTLC1O15269 473 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 GJB5O95377 273 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 CALB1P05937 261 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 GALTP07902 379 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 MMEP08473 750 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 PDGFRBP09619 1106 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 SETSIPP0DME0 302 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 ATP2A2P16615 1042 aaKnown RBP10.71□□□□□ -0.69
LDHA-216ENST00000538451 DESP17661 470 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 SMAD3P84022 425 aaKnown RBP10.71□□□□□ -0.69
LDHA-216ENST00000538451 CREMQ03060 361 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 MTF1Q14872 753 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 PTPN14Q15678 1187 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 TCTN1Q2MV58 587 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 WSCD1Q658N2 575 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 ACAD10Q6JQN1 1059 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 ZNF280DQ6N043 979 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 FAM117BQ6P1L5 589 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.71□□□□□ -0.69
LDHA-216ENST00000538451 C4orf50Q6ZRC1 276 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 TOGARAM2Q6ZUX3 1019 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 ANKS3Q6ZW76 656 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 ACOT1Q86TX2 421 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 RHOT2Q8IXI1 618 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 RNF10Q8N5U6 811 aaKnown RBP10.71□□□□□ -0.69
LDHA-216ENST00000538451 SLC4A11Q8NBS3 891 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 B3GALNT2Q8NCR0 500 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 SLC30A5Q8TAD4 765 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 IPO4Q8TEX9 1081 aaKnown RBP10.71□□□□□ -0.69
LDHA-216ENST00000538451 ELMO3Q96BJ8 720 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 ALS2CR12Q96Q35 445 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 RAD9AQ99638 391 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.71□□□□□ -0.694e-10■■■■■ 50.6
LDHA-216ENST00000538451 MRPL45Q9BRJ2 306 aaKnown RBP10.71□□□□□ -0.69
LDHA-216ENST00000538451 DESI2Q9BSY9 194 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 SYNCQ9H7C4 482 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 MRPL47Q9HD33 250 aaKnown RBP10.71□□□□□ -0.69
LDHA-216ENST00000538451 SPG21Q9NZD8 308 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 DNAJB4Q9UDY4 337 aa10.71□□□□□ -0.69
LDHA-216ENST00000538451 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.7□□□□□ -0.7
LDHA-216ENST00000538451 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.7□□□□□ -0.7
LDHA-216ENST00000538451 OR6C75A6NL08 312 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 DDX3XO00571 662 aaKnown RBP eCLIP10.7□□□□□ -0.7
LDHA-216ENST00000538451 TLL1O43897 1013 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 FTLP02792 175 aaPredicted RBP10.7□□□□□ -0.7
LDHA-216ENST00000538451 PTPN1P18031 435 aaKnown RBP10.7□□□□□ -0.7
LDHA-216ENST00000538451 ACADSBP45954 432 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 BRCC3P46736 316 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 SLC11A1P49279 550 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 GPC5P78333 572 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 DEFB103AP81534 67 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 FMO1Q01740 532 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 CYP27A1Q02318 531 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 NFE2Q16621 373 aaPredicted RBP10.7□□□□□ -0.7
LDHA-216ENST00000538451 CLEC16AQ2KHT3 1053 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 USP41Q3LFD5 358 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 DNTTIP2Q5QJE6 756 aaKnown RBP10.7□□□□□ -0.7
LDHA-216ENST00000538451 FAM171A1Q5VUB5 890 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 ARHGAP17Q68EM7 881 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 FAM109BQ6ICB4 259 aaPredicted RBP10.7□□□□□ -0.7
LDHA-216ENST00000538451 FUT10Q6P4F1 479 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 KCNT2Q6UVM3 1135 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 LCLAT1Q6UWP7 414 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 ERICH1Q86X53 443 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 CEP57Q86XR8 500 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 DEFB123Q8N688 67 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 ACRBPQ8NEB7 543 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 HASPINQ8TF76 798 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 SLC20A1Q8WUM9 679 aa10.7□□□□□ -0.7
LDHA-216ENST00000538451 KBTBD7Q8WVZ9 684 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms