RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 COLGALT1Q8NBJ5 622 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SLC4A11Q8NBS3 891 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 C3orf58Q8NDZ4 430 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ACRBPQ8NEB7 543 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 FBXO22Q8NEZ5 403 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SPATA18Q8TC71 538 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 EPS8L1Q8TE68 723 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CTNNBL1Q8WYA6 563 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CYFIP2Q96F07 1278 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 TSGA10Q9BZW7 698 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ACP6Q9NPH0 428 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CXXC1Q9P0U4 656 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CNTN6Q9UQ52 1028 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 STXBP5LQ9Y2K9 1186 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 PPP2R2CQ9Y2T4 447 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 RWDD3Q9Y3V2 267 aa11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 MRPL42Q9Y6G3 142 aaKnown RBP11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 FNDC1Q4ZHG4 1894 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-211ENST00000538363 A0A087X0T9 212 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 M0QZQ0 153 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 RTN2O75298 545 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 FAM228BP0C875 321 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CPB1P15086 417 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ABCB4P21439 1286 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 FECHP22830 423 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 LMO2P25791 158 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 TKTP29401 623 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CTNNB1P35222 781 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 PSMC1P62191 440 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CNGA2Q16280 664 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 NAA35Q5VZE5 725 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ACAD10Q6JQN1 1059 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ANKS3Q6ZW76 656 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ERICH1Q86X53 443 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SPATA2LQ8IUW3 424 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 TMEM139Q8IV31 216 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 UBR7Q8N806 425 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 B3GALNT2Q8NCR0 500 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 UBA3Q8TBC4 463 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 MICAL1Q8TDZ2 1067 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 IPO4Q8TEX9 1081 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 RIN2Q8WYP3 895 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ZNF689Q96CS4 500 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 TRIM11Q96F44 468 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 IGSF21Q96ID5 467 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ACBD6Q9BR61 282 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 TTPALQ9BTX7 342 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 MIS12Q9H081 205 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CWH43Q9H720 699 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 LZTFL1Q9NQ48 299 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ST7Q9NRC1 585 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 MYO1AQ9UBC5 1043 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 HCSTQ9UBK5 93 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 STK39Q9UEW8 545 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 HMGXB4Q9UGU5 601 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 MSRAQ9UJ68 235 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 NAGPAQ9UK23 515 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 NOCTQ9UK39 431 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SSX2IPQ9Y2D8 614 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ADGRG1Q9Y653 693 aa11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 MKI67P46013 3256 aaKnown RBP11.31□□□□□ -0.6
TNFRSF1A-211ENST00000538363 OR6C75A6NL08 312 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ESPNB1AK53 854 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 F8W810 466 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 DDX3XO00571 662 aaKnown RBP eCLIP11.3□□□□□ -0.63e-9■■□□□ 12.9
TNFRSF1A-211ENST00000538363 C2CD2LO14523 706 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 FTLP02792 175 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CYP11A1P05108 521 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ITGB1P05556 798 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 URODP06132 367 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 FMO1Q01740 532 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 SHHQ15465 462 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 IFI16Q16666 785 aaKnown RBP11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CLEC16AQ2KHT3 1053 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 VARS2Q5ST30 1063 aaKnown RBP11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 C4orf50Q6ZRC1 276 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 OSTM1Q86WC4 334 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CRIPAKQ8N1N5 446 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CRYBG2Q8N1P7 616 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 WHAMMQ8TF30 809 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 KBTBD7Q8WVZ9 684 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CPA5Q8WXQ8 436 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 VWCEQ96DN2 955 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 TWNKQ96RR1 684 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 OXCT2Q9BYC2 517 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ZNF518BQ9C0D4 1074 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 DPEP3Q9H4B8 488 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 GTF3C4Q9UKN8 822 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 GUCA1BQ9UMX6 200 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 BOLA1Q9Y3E2 137 aa11.3□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ANKRD62A6NC57 917 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 KIF5CO60282 957 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 B4GALT3O60512 393 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 ATP2C2O75185 946 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 MICAL2O94851 1124 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 LSM8O95777 96 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 CALB1P05937 261 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 FAM200BP0CF97 657 aa11.29□□□□□ -0.6
TNFRSF1A-211ENST00000538363 GZMAP12544 262 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms