RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 DEPDC1BQ8WUY9 529 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 CCDC127Q96BQ5 260 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 CNOT6LQ96LI5 555 aaKnown RBP3.8□□□□□ -1.8
PTPN22-211ENST00000538253 NELL2Q99435 816 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 BCAS3Q9H6U6 928 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 ASAH2Q9NR71 780 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 CXXC1Q9P0U4 656 aaPredicted RBP3.8□□□□□ -1.8
PTPN22-211ENST00000538253 COQ4Q9Y3A0 265 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 SRCAPQ6ZRS2 3230 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 NCANO14594 1321 aa3.8□□□□□ -1.8
PTPN22-211ENST00000538253 A8MXQ7 604 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 KCNJ18B7U540 433 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 PIRO00625 290 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ZMYND10O75800 440 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 LSM8O95777 96 aaKnown RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 HLA-DRAP01903 254 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 IMPDH2P12268 514 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ALADP13716 330 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 SCNN1AP37088 669 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 PRCPP42785 496 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 FMO5P49326 533 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 AARSP49588 968 aaKnown RBP eCLIP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 GSDMDP57764 484 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 DEFB103AP81534 67 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 STK4Q13043 487 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 KCNJ12Q14500 433 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 SLC10A6Q3KNW5 377 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 LEXMQ3ZCV2 418 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 C10orf76Q5T2E6 689 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 JADE1Q6IE81 842 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 CAVIN1Q6NZI2 390 aaKnown RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 CC2D1AQ6P1N0 951 aaPredicted RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ALKAL1Q6UXT8 129 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 SND1Q7KZF4 910 aaKnown RBP eCLIP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ANKRD13BQ86YJ7 626 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 CNGA4Q8IV77 575 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 KREMEN2Q8NCW0 462 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 VPS37AQ8NEZ2 397 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 SPDYE1Q8NFV5 336 aaPredicted RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 OR6B3Q8NGW1 331 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF461Q8TAF7 563 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 IRGQQ8WZA9 623 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 OTUB2Q96DC9 234 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 SMARCD1Q96GM5 515 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 HSFY1Q96LI6 401 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 DHRS1Q96LJ7 313 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 C8orf48Q96LL4 319 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 MED15Q96RN5 788 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 SYT15Q9BQS2 421 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 EIF2AQ9BY44 585 aaKnown RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 NACA2Q9H009 215 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 KCTD10Q9H3F6 313 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 RC3H2Q9HBD1 1191 aaKnown RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 LRRC4Q9HBW1 653 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 TMEM165Q9HC07 324 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 GDPD2Q9HCC8 539 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 DMAP1Q9NPF5 467 aaPredicted RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 GDE1Q9NZC3 331 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 TRPM5Q9NZQ8 1165 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 TMEM63CQ9P1W3 806 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 MCM3APO60318 1980 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 LCTP09848 1927 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 EIF3CLB5ME19 914 aaKnown RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 WNT7AO00755 349 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ITGB3P05106 788 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 GLI1P08151 1106 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 MYBL1P10243 752 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ZNF24P17028 368 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ACOT2P49753 483 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 RPS6KA3P51812 740 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 BCAT1P54687 386 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 RWDD2BP57060 319 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 NOP14P78316 857 aaKnown RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 GRIN1Q05586 938 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 DRP2Q13474 957 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ZBTB6Q15916 424 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 UPP1Q16831 310 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 ZC2HC1CQ53FD0 456 aaPredicted RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 FIGNQ5HY92 759 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 CLLU1OSQ5K130 101 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 C9orf50Q5SZB4 431 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 SLC8B1Q6J4K2 584 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 LRSAM1Q6UWE0 723 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 USP49Q70CQ1 688 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 TMEM110Q86TL2 294 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 TRIM59Q8IWR1 403 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 DRC7Q8IY82 874 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 UBALD2Q8IYN6 164 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 TDRD5Q8NAT2 981 aaKnown RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 TMEM35BQ8NCS4 154 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 MAFAQ8NHW3 353 aaPredicted RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 STK32AQ8WU08 396 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 TMEM40Q8WWA1 233 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 SPATA17Q96L03 361 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 KLHL5Q96PQ7 755 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 EIF3CQ99613 913 aaKnown RBP3.79□□□□□ -1.8
PTPN22-211ENST00000538253 TUBGCP2Q9BSJ2 902 aa3.79□□□□□ -1.8
PTPN22-211ENST00000538253 KIFC3Q9BVG8 833 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms