RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 CYGBQ8WWM9 190 aa11.68□□□□□ -0.54
LINC00346-201ENST00000538077 TAF6LQ9Y6J9 622 aa11.68□□□□□ -0.54
LINC00346-201ENST00000538077 NEXMIFQ5QGS0 1516 aa11.68□□□□□ -0.54
LINC00346-201ENST00000538077 HEATR9A2RTY3 570 aa11.68□□□□□ -0.54
LINC00346-201ENST00000538077 AKAP5P24588 427 aa11.68□□□□□ -0.54
LINC00346-201ENST00000538077 EPHB2P29323 1055 aa11.68□□□□□ -0.54
LINC00346-201ENST00000538077 RAP1GDS1P52306 607 aa11.68□□□□□ -0.54
LINC00346-201ENST00000538077 ZNF200P98182 395 aaPredicted RBP11.68□□□□□ -0.54
LINC00346-201ENST00000538077 GRIN1Q05586 938 aa11.68□□□□□ -0.54
LINC00346-201ENST00000538077 BYSLQ13895 437 aaKnown RBP11.68□□□□□ -0.54
LINC00346-201ENST00000538077 STILQ15468 1287 aa11.68□□□□□ -0.54
LINC00346-201ENST00000538077 KCNT1Q5JUK3 1230 aa11.68□□□□□ -0.54
LINC00346-201ENST00000538077 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
LINC00346-201ENST00000538077 AGBL3Q8NEM8 1001 aa11.68□□□□□ -0.54
LINC00346-201ENST00000538077 TSPAN17Q96FV3 270 aa11.68□□□□□ -0.54
LINC00346-201ENST00000538077 DTNAQ9Y4J8 743 aa11.68□□□□□ -0.54
LINC00346-201ENST00000538077 KIAA0391O15091 583 aaKnown RBP11.67□□□□□ -0.54
LINC00346-201ENST00000538077 KPNA1P52294 538 aaPredicted RBP11.67□□□□□ -0.54
LINC00346-201ENST00000538077 E2F4Q16254 413 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 MROH9Q5TGP6 573 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 HES6Q96HZ4 224 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 ZFP42Q96MM3 310 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 OSMRQ99650 979 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 UNKQ9C0B0 810 aaKnown RBP11.67□□□□□ -0.54
LINC00346-201ENST00000538077 SPASTQ9UBP0 616 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 CDYLQ9Y232 598 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 CNTNAP2Q9UHC6 1331 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 AKAP10O43572 662 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 CSF1RP07333 972 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 PCNAP12004 261 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 PTPN7P35236 360 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 PLA2G4AP47712 749 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 SLC11A2P49281 568 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 NCALDP61601 193 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 DDX39BQ13838 428 aaKnown RBP11.67□□□□□ -0.54
LINC00346-201ENST00000538077 PLCL1Q15111 1095 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 ARHGAP18Q8N392 663 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 PGLYRP2Q96PD5 576 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 NIF3L1Q9GZT8 377 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC00346-201ENST00000538077 EHD2Q9NZN4 543 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 DIP2AQ14689 1571 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 CST8O60676 142 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 URODP06132 367 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 KRT4P19013 534 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 ATP6V1G3Q96LB4 118 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 MAN1C1Q9NR34 630 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 MRFAP1Q9Y605 127 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.67□□□□□ -0.54
LINC00346-201ENST00000538077 ANO9A1A5B4 782 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 CKMP06732 381 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 CHN1P15882 459 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 IGFBP4P22692 258 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 SP100P23497 879 aaPredicted RBP11.67□□□□□ -0.54
LINC00346-201ENST00000538077 SLC16A1P53985 500 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 ALDH6A1Q02252 535 aaKnown RBP11.67□□□□□ -0.54
LINC00346-201ENST00000538077 EFHC1Q5JVL4 640 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 DNAJB3Q8WWF6 145 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 EIF2AQ9BY44 585 aaKnown RBP11.67□□□□□ -0.54
LINC00346-201ENST00000538077 OSGEPL1Q9H4B0 414 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 WWOXQ9NZC7 414 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 SRP72O76094 671 aaKnown RBP11.67□□□□□ -0.54
LINC00346-201ENST00000538077 ACTN3Q08043 901 aaPredicted RBP11.67□□□□□ -0.54
LINC00346-201ENST00000538077 ERAP2Q6P179 960 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 C3orf62Q6ZUJ4 267 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 ADSSL1Q8N142 457 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 DTX3LQ8TDB6 740 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 CIPCQ9C0C6 399 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 KCTD10Q9H3F6 313 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 FAM96AQ9H5X1 160 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 ETNK1Q9HBU6 452 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 MRPL40Q9NQ50 206 aaKnown RBP11.67□□□□□ -0.54
LINC00346-201ENST00000538077 TMEM39AQ9NV64 488 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 SNTG2Q9NY99 539 aa11.67□□□□□ -0.54
LINC00346-201ENST00000538077 MED24O75448 989 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 ALDH1A2O94788 518 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 IL10P22301 178 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 ITGA8P53708 1063 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 HPCAP84074 193 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 CDC16Q13042 620 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 POLD3Q15054 466 aaPredicted RBP11.66□□□□□ -0.54
LINC00346-201ENST00000538077 SLC18A3Q16572 532 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 GALNTL6Q49A17 601 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 RASGRP2Q7LDG7 609 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 GLIS2Q9BZE0 524 aaPredicted RBP11.66□□□□□ -0.54
LINC00346-201ENST00000538077 PXMP2Q9NR77 195 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 PDS5AQ29RF7 1337 aaKnown RBP11.66□□□□□ -0.54
LINC00346-201ENST00000538077 AIM2O14862 343 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 ZBTB39O15060 712 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 PCDH8O95206 1070 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 GYS1P13807 737 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 KCNJ1P48048 391 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 PDK1Q15118 436 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 SLC44A2Q8IWA5 706 aaPredicted RBP11.66□□□□□ -0.54
LINC00346-201ENST00000538077 SETBP1Q9Y6X0 1596 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 CYP2C8P10632 490 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 BACE1P56817 501 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 OCA2Q04671 838 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 CUL2Q13617 745 aa11.66□□□□□ -0.54
LINC00346-201ENST00000538077 TTC39BQ5VTQ0 682 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms