RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 BOLA2-SMG1P6H3BVE0 249 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 hCG_1984214I3L0E3 225 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 ALDH2P05091 517 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 ABHD2P08910 425 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 SMIM18P0DKX4 95 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 XRCC5P13010 732 aaKnown RBP11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 NR2F2P24468 414 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 SOX5P35711 763 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 PDK3Q15120 406 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 DCAF15Q66K64 600 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 UGT2A3Q6UWM9 527 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 RNF207Q6ZRF8 634 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 SYDE1Q6ZW31 735 aaPredicted RBP11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 TDRPQ86YL5 185 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 ZNF713Q8N859 430 aaPredicted RBP11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 TRAIPQ9BWF2 469 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 RBM38Q9H0Z9 239 aaKnown RBP11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 WNT8AQ9H1J5 351 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 TBC1D7Q9P0N9 293 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 PPM1HQ9ULR3 514 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 SORBS3O60504 671 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 PDE5AO76074 875 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 PGM3O95394 542 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 CA4P22748 312 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 ARFIP2P53365 341 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 CDK16Q00536 496 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 PDE1BQ01064 536 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 TCEAL1Q15170 157 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 KRT79Q5XKE5 535 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 FAM91A1Q658Y4 838 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 AAGABQ6PD74 315 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 GJB7Q6PEY0 223 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 Q6ZNX1 250 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 CROCCP3Q8IVE0 287 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 CEP70Q8NHQ1 597 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 MORC4Q8TE76 937 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 DQX1Q8TE96 717 aaKnown RBP11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 FAM172AQ8WUF8 416 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 CYTH2Q99418 400 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 TRIM55Q9BYV6 548 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 RAB34Q9BZG1 259 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 BMP2KQ9NSY1 1161 aaPredicted RBP11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 ANAPC5Q9UJX4 755 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 DMTF1Q9Y222 760 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 EFR3BQ9Y2G0 817 aa11.93□□□□□ -0.5
SEMA4D-221ENST00000537934 A0A0G2JND7 137 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 ARHGAP10A1A4S6 786 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 TM7SF2O76062 418 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 USP1O94782 785 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 TFAP2AP05549 437 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 ACADVLP49748 655 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 ZBTB16Q05516 673 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 MSLNQ13421 630 aaPredicted RBP11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 MTMR2Q13614 643 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 PTK6Q13882 451 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 MAPK6Q16659 721 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 PDCD4Q53EL6 469 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 SFT2D3Q587I9 215 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 OLFML1Q6UWY5 402 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 PRUNE1Q86TP1 453 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 ATP11CQ8NB49 1132 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 SNX29Q8TEQ0 813 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 HSPBAP1Q96EW2 488 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 KIAA1586Q9HCI6 787 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 ZNF180Q9UJW8 692 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 USP17L15C9J2P7 530 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 USP17L13C9JLJ4 530 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 USP17L11C9JVI0 530 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 USP17L18D6R9N7 530 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 USP17L22D6RA61 530 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 USP17L17D6RBQ6 530 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 USP17L19D6RCP7 530 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 USP17L20D6RJB6 530 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 TYROBPO43914 113 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 PAX3P23760 479 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 GCAP28676 217 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 USP17L24Q0WX57 530 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 SPIDRQ14159 915 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 CALCRLQ16602 461 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 MMEL1Q495T6 779 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 ANKRD20A4Q4UJ75 823 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 TMEM53Q6P2H8 277 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 USP17L6PQ6QN14 398 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 TREML1Q86YW5 311 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 TBCKQ8TEA7 893 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 KLRG1Q96E93 195 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 PRR11Q96HE9 360 aaPredicted RBP11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 NUDT12Q9BQG2 462 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 KLHL4Q9C0H6 718 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 PSTPIP2Q9H939 334 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 ARHGEF4Q9NR80 690 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 GCNT4Q9P109 453 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 TDRKHQ9Y2W6 561 aaKnown RBP11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 DOCK1Q14185 1865 aa11.92□□□□□ -0.5
SEMA4D-221ENST00000537934 GTPBP10A4D1E9 387 aaKnown RBP11.91□□□□□ -0.5
SEMA4D-221ENST00000537934 CCDC160A6NGH7 325 aa11.91□□□□□ -0.5
SEMA4D-221ENST00000537934 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
SEMA4D-221ENST00000537934 B2RBV5 119 aa11.91□□□□□ -0.5
SEMA4D-221ENST00000537934 CLPTM1O96005 669 aa11.91□□□□□ -0.5
SEMA4D-221ENST00000537934 TNFAIP3P21580 790 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms