RNA–Protein interactions for RNA: ENST00000537724.1

AC055720.2-201, humanhuman

TSL 3 BASIC

Gene AC055720.2, Length 172 nt, Biotype 3prime overlapping ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.2-201ENST00000537724 DLL4Q9NR61 685 aa4.8□□□□□ -1.64
AC055720.2-201ENST00000537724 INTS10Q9NVR2 710 aaKnown RBP4.8□□□□□ -1.64
AC055720.2-201ENST00000537724 HAUS2Q9NVX0 235 aa4.8□□□□□ -1.64
AC055720.2-201ENST00000537724 USP36Q9P275 1121 aaKnown RBP4.8□□□□□ -1.64
AC055720.2-201ENST00000537724 SH3BGRL2Q9UJC5 107 aa4.8□□□□□ -1.64
AC055720.2-201ENST00000537724 FBXL5Q9UKA1 691 aa4.8□□□□□ -1.64
AC055720.2-201ENST00000537724 TSC22D4Q9Y3Q8 395 aa4.8□□□□□ -1.64
AC055720.2-201ENST00000537724 SNX8Q9Y5X2 465 aa4.8□□□□□ -1.64
AC055720.2-201ENST00000537724 LRRC14BA6NHZ5 514 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 GOLGA8AA7E2F4 631 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 GOLGA8BA8MQT2 603 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 ARVCFO00192 962 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 CAPN9O14815 690 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 CASQ2O14958 399 aaPredicted RBP4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 NPC1O15118 1278 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 NKRFO15226 690 aaKnown RBP eCLIP4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 TGM5O43548 720 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 SRGAP2O75044 1071 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 PTP4A3O75365 173 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 KIAA0754O94854 1291 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 KLHL18O94889 574 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 RTN3O95197 1032 aaPredicted RBP4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 FSHBP01225 129 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 CKMP06732 381 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 QDPRP09417 244 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 FAHP16930 419 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 C5AR1P21730 350 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 HTR1BP28222 390 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 GRK3P35626 688 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 POLD2P49005 469 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 CTCFP49711 727 aaPredicted RBP4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 FXR1P51114 621 aaKnown RBP eCLIP4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 ITGA8P53708 1063 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 SLC12A2P55011 1212 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 ARF3P61204 181 aaPredicted RBP4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 ARF1P84077 181 aaKnown RBP4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 ACVR2BQ13705 512 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 PPA1Q15181 289 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 PGS1Q32NB8 556 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 ZNF585AQ6P3V2 769 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 ZNF783Q6ZMS7 281 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 BEND5Q7L4P6 421 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 NUP54Q7Z3B4 507 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 MOGAT3Q86VF5 341 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 NUP93Q8N1F7 819 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 IGSF22Q8N9C0 903 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 SLC16A11Q8NCK7 471 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 DNERQ8NFT8 737 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 UHMK1Q8TAS1 419 aaKnown RBP4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 DCAF4Q8WV16 495 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 AGAP3Q96P47 875 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 CELF4Q9BZC1 486 aaKnown RBP4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 UNKQ9C0B0 810 aaKnown RBP4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 MEGF9Q9H1U4 602 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 KCTD10Q9H3F6 313 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 RPAP3Q9H6T3 665 aaPredicted RBP4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 SUDS3Q9H7L9 328 aaPredicted RBP4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 RBM28Q9NW13 759 aaKnown RBP4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 CHORDC1Q9UHD1 332 aaPredicted RBP4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 LAMP5Q9UJQ1 280 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 ADAM29Q9UKF5 820 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 CORO2BQ9UQ03 480 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 TELO2Q9Y4R8 837 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 PCDHA9Q9Y5H5 950 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 SQORQ9Y6N5 450 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 ASXL2Q76L83 1435 aa4.79□□□□□ -1.64
AC055720.2-201ENST00000537724 BLACEA4D250 179 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 POM121BA6NF01 834 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 DTNBO60941 627 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 ALDH2P05091 517 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 GNAT1P11488 350 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 C6P13671 934 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 KRT2P35908 639 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 HADHAP40939 763 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 GLRBP48167 497 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 MTNR1BP49286 362 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 NLRP5P59047 1200 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 RBP5P82980 135 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 ALDH6A1Q02252 535 aaKnown RBP4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 BFSP1Q12934 665 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 PTK2BQ14289 1009 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 SMAD2Q15796 467 aaKnown RBP4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 SKIDA1Q1XH10 827 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 KIZQ2M2Z5 673 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 SHROOM1Q2M3G4 852 aaPredicted RBP4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 PAN2Q504Q3 1202 aaKnown RBP4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 SLFN13Q68D06 897 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 LIN54Q6MZP7 749 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 NAA16Q6N069 864 aaPredicted RBP4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 PPP1R42Q7Z4L9 355 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 DNAJB7Q7Z6W7 309 aaPredicted RBP4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 HERC6Q8IVU3 1022 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 PALM2Q8IXS6 379 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 NGEFQ8N5V2 710 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 ATG16L2Q8NAA4 619 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 CEP70Q8NHQ1 597 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 PPP1R14CQ8TAE6 165 aa4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 UTP15Q8TED0 518 aaKnown RBP4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 ZNF75CPQ92670 426 aaPredicted RBP4.78□□□□□ -1.64
AC055720.2-201ENST00000537724 ARHGEF2Q92974 986 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms