RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 LGR6Q9HBX8 967 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 OSGEPQ9NPF4 335 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 HDAC9Q9UKV0 1011 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 NENFQ9UMX5 172 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 MYH11P35749 1972 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 PP2D1A8MPX8 630 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 EYA2O00167 538 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 ATMINO43313 823 aaPredicted RBP8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 SLC26A4O43511 780 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 UGT1A9O60656 530 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 ATP5BP06576 529 aaKnown RBP8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 RAG1P15918 1043 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 UGT1A6P19224 532 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 UGT1A1P22309 533 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 UGT1A4P22310 534 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 CALML3P27482 149 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 UGT1A3P35503 534 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 UGT1A5P35504 534 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 ADD2P35612 726 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 YWHAGP61981 247 aaKnown RBP eCLIP8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 KDSRQ06136 332 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 EFTUD2Q15029 972 aaKnown RBP eCLIP8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 TRIP13Q15645 432 aaPredicted RBP8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 NPY5RQ15761 445 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 SHROOM1Q2M3G4 852 aaPredicted RBP8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 TIGD2Q4W5G0 525 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 RNF111Q6ZNA4 994 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 RELL1Q8IUW5 271 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 TMEM126BQ8IUX1 230 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 C4orf33Q8N1A6 199 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 POU5F2Q8N7G0 328 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 TTC13Q8NBP0 860 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 BBOF1Q8ND07 529 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 SH3RF3Q8TEJ3 882 aaPredicted RBP8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 GIPC2Q8TF65 315 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 TRUB1Q8WWH5 349 aaKnown RBP8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 SLCO2A1Q92959 643 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 PSD2Q9BQI7 771 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 NMUR2Q9GZQ4 415 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 HIPK3Q9H422 1215 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 SIAEQ9HAT2 523 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 UGT1A7Q9HAW7 530 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 UGT1A10Q9HAW8 530 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 UGT1A8Q9HAW9 530 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 KIAA1586Q9HCI6 787 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 ARMCX1Q9P291 453 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 ANAPC5Q9UJX4 755 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 TLL2Q9Y6L7 1015 aa8.92□□□□□ -0.98
SRGAP1-202ENST00000537556 A0A087WZG4 1122 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 SYCE1LA8MT33 242 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 CAPN14A8MX76 684 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 ERVV-2B6SEH9 535 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 TYROBPO43914 113 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 CCNT2O60583 730 aaKnown RBP8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 CRYZL1O95825 349 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 DLDP09622 509 aaKnown RBP8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 ALOX5P09917 674 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 MAN1A1P33908 653 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 ZAP70P43403 619 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 CTAG1AP78358 180 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 ADAM17P78536 824 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 SLC15A2Q16348 729 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 CYP2A13Q16696 494 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 C15orf59Q2T9L4 293 aaPredicted RBP8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 C4orf22Q6V702 233 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 USP43Q70EL4 1123 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 SV2BQ7L1I2 683 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 AMIGO2Q86SJ2 522 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 GPR180Q86V85 440 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 HEATR4Q86WZ0 1026 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 RTKN2Q8IZC4 609 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 RNF169Q8NCN4 708 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 HELQQ8TDG4 1101 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 ALG3Q92685 438 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 ZKSCAN3Q9BRR0 538 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 C2orf49Q9BVC5 232 aaPredicted RBP8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 TDRD1Q9BXT4 1180 aaKnown RBP8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 RPAP3Q9H6T3 665 aaPredicted RBP8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 MARCH7Q9H992 704 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 KCNK13Q9HB14 408 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 VPS51Q9UID3 782 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 LRP6O75581 1613 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 TM9SF1O15321 606 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 GUCY1B2O75343 617 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 C8BP07358 591 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 MYL2P10916 166 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 UCHL3P15374 230 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 AP3M2P53677 418 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 MARSP56192 900 aaKnown RBP8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 ARL4CP56559 192 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 TFAP4Q01664 338 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 KRT17Q04695 432 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 UBE3CQ15386 1083 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 SLC27A3Q5K4L6 730 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 HP1BP3Q5SSJ5 553 aaPredicted RBP8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 FBXO31Q5XUX0 539 aaPredicted RBP8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 PAOXQ6QHF9 649 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 GPR141Q7Z602 305 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 TTC7BQ86TV6 843 aa8.91□□□□□ -0.98
SRGAP1-202ENST00000537556 DNAAF5Q86Y56 855 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms