RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 PI4K2AQ9BTU6 479 aa21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 TMEM206Q9H813 350 aa21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 ITGA11Q9UKX5 1188 aa21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 L1RE1Q9UN81 338 aa21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 ATG2BQ96BY7 2078 aa21.17■□□□□ 0.98
TNFRSF1B-204ENST00000536782 ZNF638Q14966 1978 aaKnown RBP21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 A0A087X0B3 334 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 EXTL3O43909 919 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 CSH1P0DML2 217 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 CSH2P0DML3 217 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 HMGA1P17096 107 aaKnown RBP21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 SDHBP21912 280 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 DDX6P26196 483 aaKnown RBP eCLIP21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 AVPR1AP37288 418 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 NLRP12P59046 1061 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 TNK2Q07912 1038 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 BFSP1Q12934 665 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 ITPRIPL2Q3MIP1 535 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 WDR44Q5JSH3 913 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 Q6ZS52 159 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 TMEM150AQ86TG1 271 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 MAB21L3Q8N8X9 362 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 LEO1Q8WVC0 666 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 FGFBP2Q9BYJ0 223 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 ZSCAN16Q9H4T2 348 aaPredicted RBP21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 PCIF1Q9H4Z3 704 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 DDX43Q9NXZ2 648 aaKnown RBP21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 MTMR6Q9Y217 621 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 ACACBO00763 2458 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 CACNA1BQ00975 2339 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 SPAG17Q6Q759 2223 aa21.16■□□□□ 0.98
TNFRSF1B-204ENST00000536782 OBSL1O75147 1896 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 PRPF6O94906 941 aaKnown RBP21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 PAPSS2O95340 614 aaPredicted RBP21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 F11P03951 625 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 KRT19P08727 400 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 TGM1P22735 817 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 GPR15P49685 360 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 RBP5P82980 135 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 MYL7Q01449 175 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 LMNB2Q03252 620 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 INTS6LQ5JSJ4 861 aaKnown RBP21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 LAIR1Q6GTX8 287 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 PRR23BQ6ZRT6 265 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 CCDC65Q8IXS2 484 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 GPD1LQ8N335 351 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 SYNPOQ8N3V7 929 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 PDILTQ8N807 584 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 CXorf38Q8TB03 319 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 PDE11AQ9HCR9 933 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 ABCB6Q9NP58 842 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 GKN1Q9NS71 199 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 GDAP2Q9NXN4 497 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 USP18Q9UMW8 372 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 MAGED2Q9UNF1 606 aaPredicted RBP21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 SNX9Q9Y5X1 595 aa21.15■□□□□ 0.98
TNFRSF1B-204ENST00000536782 SOBPA7XYQ1 873 aa21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 PRR5-ARHGAP8B1AHC4 643 aa21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 CHURC1-FNTBB4DL54 471 aa21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 KIAA0391O15091 583 aaKnown RBP21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 TMEM191BP0C7N4 346 aa21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 ACAT1P24752 427 aaKnown RBP21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 FNTBP49356 437 aa21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 RPL10AP62906 217 aaKnown RBP21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 ARHGAP8P85298 464 aa21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 CCINQ13939 588 aa21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 LPAL2Q16609 132 aa21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 STXBP4Q6ZWJ1 553 aa21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 SPATA18Q8TC71 538 aa21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 MRPS31Q92665 395 aaKnown RBP21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 FAM83CQ9BQN1 747 aa21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 KIF9Q9HAQ2 790 aa21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 TDP1Q9NUW8 608 aa21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 CNOT1A5YKK6 2376 aaKnown RBP21.14■□□□□ 0.97
TNFRSF1B-204ENST00000536782 K7ESF4 209 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 STX6O43752 255 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 CNR2P34972 360 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 LHX1P48742 406 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 NASPP49321 788 aaPredicted RBP21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 DMWDQ09019 674 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 SIM2Q14190 667 aaPredicted RBP21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 DDR2Q16832 855 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 SDHAF4Q5VUM1 108 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 TXNDC8Q6A555 127 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 SCARA3Q6AZY7 606 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 LONP2Q86WA8 852 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 TOP6BLQ8N6T0 577 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 STKLD1Q8NE28 680 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 USP13Q92995 863 aaPredicted RBP21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 ANKRD36BP1Q96IX9 119 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 FAM84AQ96KN4 292 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 MTMR12Q9C0I1 747 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 LRRC27Q9C0I9 530 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 FOXD4L1Q9NU39 408 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 UXTQ9UBK9 157 aaPredicted RBP21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 GTF3C4Q9UKN8 822 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 CCL26Q9Y258 94 aa21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 R3HCC1Q9Y3T6 440 aaKnown RBP21.13■□□□□ 0.97
TNFRSF1B-204ENST00000536782 CYP2F1P24903 491 aa21.12■□□□□ 0.97
TNFRSF1B-204ENST00000536782 MYO1EQ12965 1108 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms