RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 C3orf70A6NLC5 250 aaPredicted RBP16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 POC1B-GALNT4F8VUJ3 575 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 ABLIM1O14639 778 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 KRT3P12035 628 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 RFC1P35251 1148 aaPredicted RBP16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 TFAMQ00059 246 aaKnown RBP16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 SPARCL1Q14515 664 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 FASTKD3Q14CZ7 662 aaKnown RBP16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 ZKSCAN8Q15776 578 aaPredicted RBP16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 ZNF699Q32M78 642 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 CGB2Q6NT52 195 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 SMC6Q96SB8 1091 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 XYLT2Q9H1B5 865 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 C2orf40Q9H1Z8 148 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 VPS37BQ9H9H4 285 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 FETUBQ9UGM5 382 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 STARD13Q9Y3M8 1113 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 B4GALT4O60513 344 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 IFNB1P01574 187 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 PRKCBP05771 671 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 EZRP15311 586 aaKnown RBP16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 KRT15P19012 456 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 ASPAP45381 313 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 LACTBP83111 547 aaPredicted RBP16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 HADHQ16836 314 aaKnown RBP16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 RIOX2Q8IUF8 465 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 RNF149Q8NC42 400 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 PRCCQ92733 491 aaPredicted RBP16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 KLHL29Q96CT2 875 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 BAIAP2L1Q9UHR4 511 aa16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 FARP1Q9Y4F1 1045 aaPredicted RBP16.87■□□□□ 0.29
CHMP1A-202ENST00000535997 MED7O43513 233 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 HOXC6P09630 235 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 PSMA2P25787 234 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 MAP2K2P36507 400 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 SKIV2L2P42285 1042 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 PDIA2Q13087 525 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 CYP4A22Q5TCH4 519 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 TSHZ1Q6ZSZ6 1077 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 THNSL1Q8IYQ7 743 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 NCAPGQ9BPX3 1015 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 PAIP2Q9BPZ3 127 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 ARHGEF3Q9NR81 526 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 AGTPBP1Q9UPW5 1226 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 IGKV6-21A0A0C4DH24 114 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 TNNC2P02585 160 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 PROZP22891 400 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 PKN2Q16513 984 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 TAZQ16635 292 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 HIF1AQ16665 826 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 ZC3H12AQ5D1E8 599 aaKnown RBP16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 HP1BP3Q5SSJ5 553 aaPredicted RBP16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 PPIL6Q8IXY8 311 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 ACSF2Q96CM8 615 aaPredicted RBP16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 HAUS1Q96CS2 278 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 FAXDC2Q96IV6 333 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 RMDN2Q96LZ7 410 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 PTPRHQ9HD43 1115 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 WDR35Q9P2L0 1181 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 SNCAIPQ9Y6H5 919 aa16.86■□□□□ 0.29
CHMP1A-202ENST00000535997 SOWAHBA6NEL2 793 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 SPAG7O75391 227 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 KCNJ2P63252 427 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 SLC25A11Q02978 314 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 MGAT5Q09328 741 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 MPZL3Q6UWV2 235 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 BBS12Q6ZW61 710 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 ASRGL1Q7L266 308 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 ACTL9Q8TC94 416 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 ANKRD36BP1Q96IX9 119 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 PSMC3IPQ9P2W1 217 aaPredicted RBP16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 PPP2R3BQ9Y5P8 575 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 LOC285556D6RIA3 1793 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 SMAPO00193 183 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 ACKR2O00590 384 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 LRCH4O75427 683 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 KDELR1P24390 212 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 PHBP35232 272 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 GEMIN4P57678 1058 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 PDK4Q16654 411 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 PTPN20Q4JDL3 420 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 DENND1BQ6P3S1 775 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 ECHDC2Q86YB7 292 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 ARFGAP1Q8N6T3 406 aa16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 SSU72Q9NP77 194 aaKnown RBP16.85■□□□□ 0.29
CHMP1A-202ENST00000535997 IGF2BP3O00425 579 aaKnown RBP eCLIP16.84■□□□□ 0.299e-11■■□□□ 12.9
CHMP1A-202ENST00000535997 CST8O60676 142 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 ALADP13716 330 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 CCNB1P14635 433 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 ARL4CP56559 192 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 OTUD4Q01804 1114 aaKnown RBP16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 MYO1EQ12965 1108 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 EFHC2Q5JST6 749 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 PLPPR4Q7Z2D5 763 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.84■□□□□ 0.298e-7■■□□□ 12.1
CHMP1A-202ENST00000535997 PYROXD1Q8WU10 500 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 FZD8Q9H461 694 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 BTBD7Q9P203 1132 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 PHTF1Q9UMS5 762 aa16.84■□□□□ 0.29
CHMP1A-202ENST00000535997 LTBP3Q9NS15 1303 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms