RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 SUPT20HL1Q3ZLR7 823 aa5.96□□□□□ -1.46
VBP1-203ENST00000535916 CEP78Q5JTW2 689 aa5.96□□□□□ -1.46
VBP1-203ENST00000535916 MORN5Q5VZ52 161 aa5.96□□□□□ -1.46
VBP1-203ENST00000535916 HEATR3Q7Z4Q2 680 aa5.96□□□□□ -1.46
VBP1-203ENST00000535916 FANCBQ8NB91 859 aa5.96□□□□□ -1.46
VBP1-203ENST00000535916 QTRT1Q9BXR0 403 aaKnown RBP5.96□□□□□ -1.46
VBP1-203ENST00000535916 MRPL46Q9H2W6 279 aaKnown RBP5.96□□□□□ -1.46
VBP1-203ENST00000535916 WDCPQ9H6R7 721 aa5.96□□□□□ -1.46
VBP1-203ENST00000535916 FEZ2Q9UHY8 353 aaPredicted RBP5.96□□□□□ -1.46
VBP1-203ENST00000535916 ZDHHC8Q9ULC8 765 aa5.96□□□□□ -1.46
VBP1-203ENST00000535916 GNAI2P04899 355 aa5.95□□□□□ -1.46
VBP1-203ENST00000535916 CTGFP29279 349 aa5.95□□□□□ -1.46
VBP1-203ENST00000535916 HK3P52790 923 aa5.95□□□□□ -1.46
VBP1-203ENST00000535916 SP2Q02086 613 aa5.95□□□□□ -1.46
VBP1-203ENST00000535916 AARS2Q5JTZ9 985 aaKnown RBP5.95□□□□□ -1.46
VBP1-203ENST00000535916 PRAMEF17Q5VTA0 474 aa5.95□□□□□ -1.46
VBP1-203ENST00000535916 ANKRD16Q6P6B7 361 aa5.95□□□□□ -1.46
VBP1-203ENST00000535916 PPP1R3BQ86XI6 285 aa5.95□□□□□ -1.46
VBP1-203ENST00000535916 MIER2Q8N344 545 aa5.95□□□□□ -1.46
VBP1-203ENST00000535916 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.95□□□□□ -1.46
VBP1-203ENST00000535916 FAM46DQ8NEK8 389 aa5.95□□□□□ -1.46
VBP1-203ENST00000535916 RGMAQ96B86 450 aa5.95□□□□□ -1.46
VBP1-203ENST00000535916 ZBTB9Q96C00 473 aa5.95□□□□□ -1.46
VBP1-203ENST00000535916 ZNF48Q96MX3 618 aaPredicted RBP5.95□□□□□ -1.46
VBP1-203ENST00000535916 FCRL4Q96PJ5 515 aa5.95□□□□□ -1.46
VBP1-203ENST00000535916 SLC13A1Q9BZW2 595 aa5.95□□□□□ -1.46
VBP1-203ENST00000535916 BHMT2Q9H2M3 363 aa5.95□□□□□ -1.46
VBP1-203ENST00000535916 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.95□□□□□ -1.46
VBP1-203ENST00000535916 DLL3Q9NYJ7 618 aa5.95□□□□□ -1.46
VBP1-203ENST00000535916 QSOX1O00391 747 aa5.94□□□□□ -1.46
VBP1-203ENST00000535916 PPP6CO00743 305 aa5.94□□□□□ -1.46
VBP1-203ENST00000535916 AHSGP02765 367 aa5.94□□□□□ -1.46
VBP1-203ENST00000535916 CYP2C18P33260 490 aa5.94□□□□□ -1.46
VBP1-203ENST00000535916 EEFSECP57772 596 aaKnown RBP5.94□□□□□ -1.46
VBP1-203ENST00000535916 TREML2Q5T2D2 321 aa5.94□□□□□ -1.46
VBP1-203ENST00000535916 THEMIS2Q5TEJ8 643 aa5.94□□□□□ -1.46
VBP1-203ENST00000535916 SLC18B1Q6NT16 456 aa5.94□□□□□ -1.46
VBP1-203ENST00000535916 DTX2Q86UW9 622 aa5.94□□□□□ -1.46
VBP1-203ENST00000535916 CPA6Q8N4T0 437 aa5.94□□□□□ -1.46
VBP1-203ENST00000535916 DDX17Q92841 729 aaKnown RBP5.94□□□□□ -1.46
VBP1-203ENST00000535916 SLC46A1Q96NT5 459 aa5.94□□□□□ -1.46
VBP1-203ENST00000535916 ZNF521Q96K83 1311 aa5.94□□□□□ -1.46
VBP1-203ENST00000535916 DCLK1O15075 740 aa5.93□□□□□ -1.46
VBP1-203ENST00000535916 SLC16A3O15427 465 aaKnown RBP5.93□□□□□ -1.46
VBP1-203ENST00000535916 FTLP02792 175 aaPredicted RBP5.93□□□□□ -1.46
VBP1-203ENST00000535916 IGKV2-30P06310 120 aa5.93□□□□□ -1.46
VBP1-203ENST00000535916 PDCP20941 246 aa5.93□□□□□ -1.46
VBP1-203ENST00000535916 EVA1CP58658 441 aa5.93□□□□□ -1.46
VBP1-203ENST00000535916 FAM160B1Q5W0V3 765 aa5.93□□□□□ -1.46
VBP1-203ENST00000535916 ICE2Q659A1 982 aa5.93□□□□□ -1.46
VBP1-203ENST00000535916 SLC2A7Q6PXP3 512 aa5.93□□□□□ -1.46
VBP1-203ENST00000535916 ZNF804AQ7Z570 1209 aa5.93□□□□□ -1.46
VBP1-203ENST00000535916 NELL2Q99435 816 aa5.93□□□□□ -1.46
VBP1-203ENST00000535916 MACROD1Q9BQ69 325 aa5.93□□□□□ -1.46
VBP1-203ENST00000535916 TTYH3Q9C0H2 523 aa5.93□□□□□ -1.46
VBP1-203ENST00000535916 LMBRD1Q9NUN5 540 aa5.93□□□□□ -1.46
VBP1-203ENST00000535916 HESX1Q9UBX0 185 aa5.93□□□□□ -1.46
VBP1-203ENST00000535916 PRRT4C9JH25 899 aa5.92□□□□□ -1.46
VBP1-203ENST00000535916 SLC16A6O15403 523 aa5.92□□□□□ -1.46
VBP1-203ENST00000535916 TLR5O60602 858 aa5.92□□□□□ -1.46
VBP1-203ENST00000535916 BMP15O95972 392 aa5.92□□□□□ -1.46
VBP1-203ENST00000535916 IL6RP08887 468 aaPredicted RBP5.92□□□□□ -1.46
VBP1-203ENST00000535916 PIM1P11309 404 aaPredicted RBP5.92□□□□□ -1.46
VBP1-203ENST00000535916 ENGP17813 658 aa5.92□□□□□ -1.46
VBP1-203ENST00000535916 MAP2K6P52564 334 aa5.92□□□□□ -1.46
VBP1-203ENST00000535916 CYP4F2P78329 520 aa5.92□□□□□ -1.46
VBP1-203ENST00000535916 EXOSC9Q06265 439 aaKnown RBP5.92□□□□□ -1.46
VBP1-203ENST00000535916 PCID2Q5JVF3 399 aa5.92□□□□□ -1.46
VBP1-203ENST00000535916 SLC9A4Q6AI14 798 aa5.92□□□□□ -1.46
VBP1-203ENST00000535916 NAPRTQ6XQN6 538 aa5.92□□□□□ -1.46
VBP1-203ENST00000535916 PRPF38AQ8NAV1 312 aaKnown RBP5.92□□□□□ -1.46
VBP1-203ENST00000535916 DUSP22Q9NRW4 184 aa5.92□□□□□ -1.46
VBP1-203ENST00000535916 SERTAD3Q9UJW9 196 aa5.92□□□□□ -1.46
VBP1-203ENST00000535916 SSX2IPQ9Y2D8 614 aa5.92□□□□□ -1.46
VBP1-203ENST00000535916 PCDHA1Q9Y5I3 950 aa5.92□□□□□ -1.46
VBP1-203ENST00000535916 DTNBO60941 627 aa5.91□□□□□ -1.46
VBP1-203ENST00000535916 MOSPD3O75425 235 aa5.91□□□□□ -1.46
VBP1-203ENST00000535916 TUBB4AP04350 444 aa5.91□□□□□ -1.46
VBP1-203ENST00000535916 TYRP14679 529 aa5.91□□□□□ -1.46
VBP1-203ENST00000535916 SFPQP23246 707 aaKnown RBP eCLIP5.91□□□□□ -1.46
VBP1-203ENST00000535916 CCND1P24385 295 aa5.91□□□□□ -1.46
VBP1-203ENST00000535916 RNF187Q5TA31 235 aaPredicted RBP5.91□□□□□ -1.46
VBP1-203ENST00000535916 WDR53Q7Z5U6 358 aaPredicted RBP5.91□□□□□ -1.46
VBP1-203ENST00000535916 PRR18Q8N4B5 295 aa5.91□□□□□ -1.46
VBP1-203ENST00000535916 PCSK9Q8NBP7 692 aaKnown RBP5.91□□□□□ -1.46
VBP1-203ENST00000535916 DENND1AQ8TEH3 1009 aa5.91□□□□□ -1.46
VBP1-203ENST00000535916 SMAD5Q99717 465 aaKnown RBP5.91□□□□□ -1.46
VBP1-203ENST00000535916 FNDC1Q4ZHG4 1894 aaPredicted RBP5.91□□□□□ -1.46
VBP1-203ENST00000535916 MYO1FO00160 1098 aa5.9□□□□□ -1.46
VBP1-203ENST00000535916 DNAJB5O75953 348 aa5.9□□□□□ -1.46
VBP1-203ENST00000535916 FESP07332 822 aa5.9□□□□□ -1.46
VBP1-203ENST00000535916 AMPD3Q01432 767 aa5.9□□□□□ -1.46
VBP1-203ENST00000535916 LONRF3Q496Y0 759 aa5.9□□□□□ -1.46
VBP1-203ENST00000535916 ARHGAP40Q5TG30 622 aa5.9□□□□□ -1.46
VBP1-203ENST00000535916 SFRP4Q6FHJ7 346 aaPredicted RBP5.9□□□□□ -1.46
VBP1-203ENST00000535916 LRRC71Q8N4P6 559 aa5.9□□□□□ -1.46
VBP1-203ENST00000535916 ATG4AQ8WYN0 398 aa5.9□□□□□ -1.46
VBP1-203ENST00000535916 SH2B3Q9UQQ2 575 aa5.9□□□□□ -1.46
VBP1-203ENST00000535916 TBC1D30Q9Y2I9 924 aa5.9□□□□□ -1.46
VBP1-203ENST00000535916 IKBKBO14920 756 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms