RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 MYCLP1P12525 358 aaPredicted RBP7.08□□□□□ -1.28
USP28-202ENST00000535607 PRKCAP17252 672 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 FGFR2P21802 821 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 CCNE1P24864 410 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 HPDP32754 393 aaPredicted RBP7.08□□□□□ -1.28
USP28-202ENST00000535607 KIF11P52732 1056 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 BIRC2Q13490 618 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 SNX17Q15036 470 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 PPP1R7Q15435 360 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 SLC9C1Q4G0N8 1177 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 COBLL1Q53SF7 1204 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 KCTD16Q68DU8 428 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 TTC19Q6DKK2 380 aaPredicted RBP7.08□□□□□ -1.28
USP28-202ENST00000535607 DENND5AQ6IQ26 1287 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 TLDC1Q6P9B6 456 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 LBX2Q6XYB7 198 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 C15orf52Q6ZUT6 534 aaKnown RBP7.08□□□□□ -1.28
USP28-202ENST00000535607 CEP68Q76N32 757 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 CYB5R4Q7L1T6 521 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 SLCO6A1Q86UG4 719 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 RAB11FIP4Q86YS3 637 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 C2CD5Q86YS7 1000 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 CCDC103Q8IW40 242 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 LMNTD2Q8IXW0 634 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 GSPT2Q8IYD1 628 aaKnown RBP7.08□□□□□ -1.28
USP28-202ENST00000535607 PPM1KQ8N3J5 372 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 CFAP61Q8NHU2 1237 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 TBC1D31Q96DN5 1066 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 RRP36Q96EU6 259 aaKnown RBP7.08□□□□□ -1.28
USP28-202ENST00000535607 CHMP6Q96FZ7 201 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 RAB3IPQ96QF0 476 aaPredicted RBP7.08□□□□□ -1.28
USP28-202ENST00000535607 NAP1L3Q99457 506 aaPredicted RBP7.08□□□□□ -1.28
USP28-202ENST00000535607 TSG101Q99816 390 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 PUS3Q9BZE2 481 aaKnown RBP7.08□□□□□ -1.28
USP28-202ENST00000535607 TRIM7Q9C029 511 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 RAB17Q9H0T7 212 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 EBF2Q9HAK2 575 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 NOD2Q9HC29 1040 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 TRIM10Q9UDY6 481 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 BAIAP2L1Q9UHR4 511 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 CORO1CQ9ULV4 474 aaPredicted RBP7.08□□□□□ -1.28
USP28-202ENST00000535607 NFU1Q9UMS0 254 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 KCNJ14Q9UNX9 436 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 C15orf41Q9Y2V0 281 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 ZNF281Q9Y2X9 895 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 RWDD3Q9Y3V2 267 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 ATP6V0A2Q9Y487 856 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 PCDHA8Q9Y5H6 950 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 CACNA1SQ13698 1873 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 ARFGEF1Q9Y6D6 1849 aa7.08□□□□□ -1.28
USP28-202ENST00000535607 TAF1P21675 1872 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 ZNF233A6NK53 670 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 CCDC169A6NNP5 214 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 B4DLN1 442 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 AHCYL1O43865 530 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 RTN2O75298 545 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 ATP5HO75947 161 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 RHOBTB3O94955 611 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 SNUPNO95149 360 aaKnown RBP7.07□□□□□ -1.28
USP28-202ENST00000535607 KRT14P02533 472 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 FUCA1P04066 466 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 SERPING1P05155 500 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 RNASE1P07998 156 aaKnown RBP7.07□□□□□ -1.28
USP28-202ENST00000535607 LCP1P13796 627 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 PAX7P23759 505 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 GRK2P25098 689 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 ANXA13P27216 316 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 ATP5DP30049 168 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 GRK3P35626 688 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 SOX5P35711 763 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 BCL6P41182 706 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 UBA7P41226 1012 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 PRCPP42785 496 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 GP2P55259 537 aaKnown RBP7.07□□□□□ -1.28
USP28-202ENST00000535607 ELF3P78545 371 aaPredicted RBP7.07□□□□□ -1.28
USP28-202ENST00000535607 CYP4F8P98187 520 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 CYP4F3Q08477 520 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 NR0B2Q15466 257 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 INF2Q27J81 1249 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 ARTNQ5T4W7 220 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 BICRALQ6AI39 1079 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 GALNT17Q6IS24 598 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 WDR59Q6PJI9 974 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 FOXR2Q6PJQ5 311 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 TAOK1Q7L7X3 1001 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 SP8Q8IXZ3 490 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 GIMAP8Q8ND71 665 aaPredicted RBP7.07□□□□□ -1.28
USP28-202ENST00000535607 GSTCDQ8NEC7 633 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 ABHD4Q8TB40 342 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 SLC7A14Q8TBB6 771 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 CHAC2Q8WUX2 184 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 P2RX5Q93086 422 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 SPDL1Q96EA4 605 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 DTNBP1Q96EV8 351 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 EPSTI1Q96J88 318 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 AK8Q96MA6 479 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 PAIP2Q9BPZ3 127 aaKnown RBP7.07□□□□□ -1.28
USP28-202ENST00000535607 G6PC3Q9BUM1 346 aa7.07□□□□□ -1.28
USP28-202ENST00000535607 PUS7LQ9H0K6 701 aaKnown RBP7.07□□□□□ -1.28
USP28-202ENST00000535607 RABEP2Q9H5N1 569 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms