RNA–Protein interactions for RNA: ENST00000535601.5

HTATSF1-204, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 3,019 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-204ENST00000535601 CUL1Q13616 776 aa19.32■□□□□ 0.68
HTATSF1-204ENST00000535601 PPP1R7Q15435 360 aa19.32■□□□□ 0.68
HTATSF1-204ENST00000535601 SNX27Q96L92 541 aa19.32■□□□□ 0.68
HTATSF1-204ENST00000535601 MED4Q9NPJ6 270 aa19.32■□□□□ 0.68
HTATSF1-204ENST00000535601 SMIM35A0A1B0GVV1 85 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 KRT1P04264 644 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 PRKCZQ05513 592 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 CEP85LQ5SZL2 805 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 PPP1R26Q5T8A7 1209 aaPredicted RBP19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 ZDHHC24Q6UX98 284 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 RHOT1Q8IXI2 618 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 IQCKQ8N0W5 287 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 ARFGAP1Q8N6T3 406 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 GOLGA6L1Q8N7Z2 621 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 RUBCNQ92622 972 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 TSPAN16Q9UKR8 245 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 MTUS1Q9ULD2 1270 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 SPTLC1O15269 473 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 CALB1P05937 261 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 PSMA2P25787 234 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 CHRNA3P32297 505 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 ATP1A2P50993 1020 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 CDO1Q16878 200 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 TAB3Q8N5C8 712 aaPredicted RBP19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 GRHL1Q9NZI5 618 aa19.31■□□□□ 0.68
HTATSF1-204ENST00000535601 GOLGA6CA6NDK9 693 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 SMIM23A6NLE4 172 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 BHMG1C9JSJ3 638 aaPredicted RBP19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 GOLGA6DP0CG33 693 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 KRT3P12035 628 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 IL1R2P27930 398 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 RABGGTBP53611 331 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 KRT17Q04695 432 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 NBPF20Q3BBV1 942 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 TWF2Q6IBS0 349 aaKnown RBP19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 LPPQ93052 612 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 FMO2Q99518 471 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 OSBPL8Q9BZF1 889 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 GOLGA6AQ9NYA3 693 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 PCDHGC3Q9UN70 934 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 LRRD1A4D1F6 860 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 HAS3O00219 553 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 FSCN2O14926 492 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 CD48P09326 243 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 LMO2P25791 158 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 YARSP54577 528 aaKnown RBP19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 TMC3Q7Z5M5 1100 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 XYLT1Q86Y38 959 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 GLIS1Q8NBF1 620 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 OR6B3Q8NGW1 331 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 VCPIP1Q96JH7 1222 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 ZDHHC18Q9NUE0 388 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 BCCIPQ9P287 314 aaKnown RBP eCLIP19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 ITGA11Q9UKX5 1188 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 C2CD2Q9Y426 696 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 E5RJQ4 531 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 PDCLQ13371 301 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 B3GNT5Q9BYG0 378 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 IP6K2Q9UHH9 426 aa19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.3■□□□□ 0.68
HTATSF1-204ENST00000535601 LSM8O95777 96 aaKnown RBP19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 HSPA9P38646 679 aaKnown RBP19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 SLC1A1P43005 524 aa19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 YWHAEP62258 255 aaKnown RBP19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 GOLGA7BQ2TAP0 167 aa19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 PPP1R15BQ5SWA1 713 aa19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 UBXN11Q5T124 520 aa19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 GDF6Q6KF10 455 aaPredicted RBP19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 MSL3Q8N5Y2 521 aaKnown RBP19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 RAB17Q9H0T7 212 aa19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 ASIC3Q9UHC3 531 aa19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 BARX2Q9UMQ3 279 aaPredicted RBP19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 ZNF236Q9UL36 1845 aa19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 SMIM28A0A1B0GU29 152 aa19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 ETS1P14921 441 aa19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 GPD2P43304 727 aa19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 C15orf59Q2T9L4 293 aaPredicted RBP19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 DCAF4L1Q3SXM0 396 aa19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 FAM102AQ5T9C2 384 aaPredicted RBP19.29■□□□□ 0.68
HTATSF1-204ENST00000535601 SHBGP04278 402 aa19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 ZSCAN5DPP0CG00 497 aa19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 CCDC130P13994 396 aa19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 AKR1A1P14550 325 aa19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 CCND3P30281 292 aaPredicted RBP19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 TRNP1Q6NT89 227 aa19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 C3orf20Q8ND61 904 aa19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 PCYOX1Q9UHG3 505 aa19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 IPPQ9Y573 584 aa19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 FGFR1P11362 822 aa19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 ADORA2BP29275 332 aa19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 FAM228AQ86W67 206 aa19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 RNF169Q8NCN4 708 aa19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 SEC14L1Q92503 715 aa19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 DCLK3Q9C098 648 aa19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 MIS12Q9H081 205 aa19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 FAM114A2Q9NRY5 505 aa19.28■□□□□ 0.68
HTATSF1-204ENST00000535601 ECEL1O95672 775 aa19.27■□□□□ 0.68
HTATSF1-204ENST00000535601 PFKMP08237 780 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms