RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 TRIM8Q9BZR9 551 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 PITPNM2Q9BZ72 1349 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 TMEM154Q6P9G4 183 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 HDDC2Q7Z4H3 204 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 SLC25A13Q9UJS0 675 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 ERCC6L2Q5T890 1561 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 ITIH6Q6UXX5 1313 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 CNTNAP5Q8WYK1 1306 aa13.16□□□□□ -0.3
SPG11-203ENST00000535302 ATP12AP54707 1039 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 PTK7Q13308 1070 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 RAD9BQ6WBX8 426 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 CCDC103Q8IW40 242 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 GSSP48637 474 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 ORC2Q13416 577 aaPredicted RBP13.15□□□□□ -0.3
SPG11-203ENST00000535302 KCNV1Q6PIU1 500 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 SPATA18Q8TC71 538 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 RHBDL2Q9NX52 303 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 TFRCP02786 760 aaKnown RBP13.15□□□□□ -0.3
SPG11-203ENST00000535302 SPATA21Q7Z572 469 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 ACER1Q8TDN7 264 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 A0A1B0GTH6 734 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 SLC1A1P43005 524 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 HPCAP84074 193 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 MED21Q13503 144 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 MROH9Q5TGP6 573 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 CCDC60Q8IWA6 550 aaPredicted RBP13.15□□□□□ -0.3
SPG11-203ENST00000535302 GPRC5AQ8NFJ5 357 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 SH3TC2Q8TF17 1288 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 ARHGEF26Q96DR7 871 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 TSSK1BQ9BXA7 367 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 FLT3P36888 993 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 CLK1P49759 484 aaKnown RBP13.15□□□□□ -0.3
SPG11-203ENST00000535302 TMED8Q6PL24 325 aaPredicted RBP13.15□□□□□ -0.3
SPG11-203ENST00000535302 MED15Q96RN5 788 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 NT5C1AQ9BXI3 368 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 GPATCH2LQ9NWQ4 482 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 FZD1Q9UP38 647 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 ADCY10Q96PN6 1610 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 CTDNEP1O95476 244 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 DLGAP3O95886 979 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 POU1F1P28069 291 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 ITGA8P53708 1063 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 CSNK2BP67870 215 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 RABL6Q3YEC7 729 aaPredicted RBP13.15□□□□□ -0.3
SPG11-203ENST00000535302 E4F1Q66K89 784 aaPredicted RBP13.15□□□□□ -0.3
SPG11-203ENST00000535302 DENND5BQ6ZUT9 1274 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 PRPF39Q86UA1 669 aaKnown RBP13.15□□□□□ -0.3
SPG11-203ENST00000535302 HPDLQ96IR7 371 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 SH3GL3Q99963 347 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 STOML1Q9UBI4 398 aa13.15□□□□□ -0.3
SPG11-203ENST00000535302 GSTM1P09488 218 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 MYL2P10916 166 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 CCZ1BP86790 482 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 CCZ1P86791 482 aaPredicted RBP13.14□□□□□ -0.31
SPG11-203ENST00000535302 KCNT1Q5JUK3 1230 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 MRPL1Q9BYD6 325 aaKnown RBP13.14□□□□□ -0.31
SPG11-203ENST00000535302 GPBP1L1Q9HC44 474 aaPredicted RBP13.14□□□□□ -0.31
SPG11-203ENST00000535302 SLC30A1Q9Y6M5 507 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 FDPSP14324 419 aaKnown RBP13.14□□□□□ -0.31
SPG11-203ENST00000535302 INPP5AQ14642 412 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 C3orf62Q6ZUJ4 267 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 UTS2BQ765I0 119 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 NLRP9Q7RTR0 991 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 FBXO16Q8IX29 292 aaPredicted RBP13.14□□□□□ -0.31
SPG11-203ENST00000535302 TSC22D4Q9Y3Q8 395 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 TET3O43151 1660 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 CST8O60676 142 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 SGPL1O95470 568 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 GPD1P21695 349 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 ATN1P54259 1190 aaPredicted RBP13.14□□□□□ -0.31
SPG11-203ENST00000535302 BYSLQ13895 437 aaKnown RBP13.14□□□□□ -0.31
SPG11-203ENST00000535302 DGKDQ16760 1214 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 TEDDM1Q5T9Z0 273 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 KATNAL1Q9BW62 490 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 NYAP2Q9P242 653 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 PFASO15067 1338 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 IQCMA0A1B0GVH7 501 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 PCNAP12004 261 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 CHI3L1P36222 383 aaPredicted RBP13.14□□□□□ -0.31
SPG11-203ENST00000535302 SERPINB4P48594 390 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 MAP3K10Q02779 954 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 PRR23CQ6ZRP0 262 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 DEPDC7Q96QD5 511 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 DDX50Q9BQ39 737 aaKnown RBP13.14□□□□□ -0.31
SPG11-203ENST00000535302 NMRK2Q9NPI5 230 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 TRPM1Q7Z4N2 1603 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 LOC102724159A0A0B4J2E5 919 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 PWP2Q15269 919 aaKnown RBP13.14□□□□□ -0.31
SPG11-203ENST00000535302 SLC30A10Q6XR72 485 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 COMMD2Q86X83 199 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 PARVBQ9HBI1 364 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.14□□□□□ -0.31
SPG11-203ENST00000535302 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.14□□□□□ -0.31
SPG11-203ENST00000535302 RFX7Q2KHR2 1363 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 C19orf81C9J6K1 198 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 RHOBTB3O94955 611 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 MAGEA9P43362 315 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 PLA2G4AP47712 749 aa13.14□□□□□ -0.31
SPG11-203ENST00000535302 ZNF200P98182 395 aaPredicted RBP13.14□□□□□ -0.31
SPG11-203ENST00000535302 KYNUQ16719 465 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms