RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 YARSP54577 528 aaKnown RBP9.03□□□□□ -0.96
CLIP1-206ENST00000535290 CFHR1Q03591 330 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 TXNDC8Q6A555 127 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 GLRX5Q86SX6 157 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 SFTPA1Q8IWL2 248 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 ALLCQ8N6M5 410 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 GIPC2Q8TF65 315 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 CCDC43Q96MW1 224 aaKnown RBP9.03□□□□□ -0.96
CLIP1-206ENST00000535290 GCNAQ96QF7 691 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 SEPT5Q99719 369 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-206ENST00000535290 CCDC94Q9BW85 323 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-206ENST00000535290 CDT1Q9H211 546 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 POLD4Q9HCU8 107 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 ANO2Q9NQ90 1003 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 TOPORSQ9NS56 1045 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-206ENST00000535290 TOR4AQ9NXH8 423 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 KIAA1522Q9P206 1035 aaPredicted RBP9.03□□□□□ -0.96
CLIP1-206ENST00000535290 WNT6Q9Y6F9 365 aa9.03□□□□□ -0.96
CLIP1-206ENST00000535290 KNL1Q8NG31 2342 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 OR6C75A6NL08 312 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 SGK1O00141 431 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 F11P03951 625 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 SYPP08247 313 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 ATXN1LP0C7T5 689 aaKnown RBP9.02□□□□□ -0.97
CLIP1-206ENST00000535290 IFNAR1P17181 557 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 ATP2B1P20020 1258 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 HSPA4P34932 840 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 OPRD1P41143 372 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 RPL6Q02878 288 aaKnown RBP9.02□□□□□ -0.97
CLIP1-206ENST00000535290 ZNF33AQ06730 810 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 SRSF1Q07955 248 aaKnown RBP eCLIP9.02□□□□□ -0.97
CLIP1-206ENST00000535290 MTF1Q14872 753 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 EML3Q32P44 896 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 LMBRD2Q68DH5 695 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-206ENST00000535290 KRT25Q7Z3Z0 450 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 NEK8Q86SG6 692 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 IL17RCQ8NAC3 791 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 TXNDC5Q8NBS9 432 aaKnown RBP9.02□□□□□ -0.97
CLIP1-206ENST00000535290 TTC16Q8NEE8 873 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 MCPH1Q8NEM0 835 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 CCDC26Q8TAB7 109 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 DEPTORQ8TB45 409 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 OSCP1Q8WVF1 389 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 HMGB4Q8WW32 186 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 BRF1Q92994 677 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 AIFM3Q96NN9 605 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 ESYT1Q9BSJ8 1104 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 LINC00597Q9H2U6 94 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 NCOA5Q9HCD5 579 aaKnown RBP9.02□□□□□ -0.97
CLIP1-206ENST00000535290 DUS2Q9NX74 493 aaKnown RBP9.02□□□□□ -0.97
CLIP1-206ENST00000535290 CNTN3Q9P232 1028 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 BCCIPQ9P287 314 aaKnown RBP eCLIP9.02□□□□□ -0.97
CLIP1-206ENST00000535290 TUBGCP4Q9UGJ1 667 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 PCOLCE2Q9UKZ9 415 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 TNFSF13BQ9Y275 285 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 PCDH15Q96QU1 1955 aa9.02□□□□□ -0.97
CLIP1-206ENST00000535290 NUP210Q8TEM1 1887 aaPredicted RBP9.02□□□□□ -0.97
CLIP1-206ENST00000535290 PIEZO2Q9H5I5 2752 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 ADAMTS9Q9P2N4 1935 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 NID2Q14112 1375 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 TRIP11Q15643 1979 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 AP5Z1O43299 807 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 DKK1O94907 266 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 KLF8O95600 359 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-206ENST00000535290 XRCC6P12956 609 aaKnown RBP eCLIP9.01□□□□□ -0.97
CLIP1-206ENST00000535290 GCFC2P16383 781 aaKnown RBP9.01□□□□□ -0.97
CLIP1-206ENST00000535290 NAMPTP43490 491 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 NLRP12P59046 1061 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 CCT2P78371 535 aaKnown RBP9.01□□□□□ -0.97
CLIP1-206ENST00000535290 MESP2Q0VG99 397 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 MYBPC2Q14324 1141 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 VEPH1Q14D04 833 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 GAB4Q2WGN9 574 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 MGAT5BQ3V5L5 792 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 EMC10Q5UCC4 262 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 RNF20Q5VTR2 975 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 Q6ZUG5 572 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 RABEPKQ7Z6M1 372 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 USP37Q86T82 979 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 MON1AQ86VX9 555 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 SLC41A1Q8IVJ1 513 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 EFCAB13Q8IY85 973 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 PGBD3Q8N328 593 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 EFCAB3Q8N7B9 438 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 OR10T2Q8NGX3 314 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 FCRL3Q96P31 734 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-206ENST00000535290 ACAP3Q96P50 834 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 OXCT2Q9BYC2 517 aaPredicted RBP9.01□□□□□ -0.97
CLIP1-206ENST00000535290 KIF9Q9HAQ2 790 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 PTPRHQ9HD43 1115 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 ZDHHC4Q9NPG8 344 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 ZMYM5Q9UJ78 669 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 KCNJ14Q9UNX9 436 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 ARID2Q68CP9 1835 aa9.01□□□□□ -0.97
CLIP1-206ENST00000535290 PTPRDP23468 1912 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 A0A1W2PQD8 194 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 TCRBV21S2A2A0A5A6 115 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 CAPN9O14815 690 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 ADAM23O75077 832 aa9□□□□□ -0.97
CLIP1-206ENST00000535290 SPATA31C1P0DKV0 1188 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms