RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 CTHP32929 405 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 CXCL12P48061 93 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 SOX9P48436 509 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 WNT7BP56706 349 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 RBP5P82980 135 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 MYO1EQ12965 1108 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 DCLK2Q8N568 766 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 GPR161Q8N6U8 529 aaKnown RBP19.85■□□□□ 0.77
CTSB-233ENST00000534636 ZSWIM2Q8NEG5 633 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 SPATA18Q8TC71 538 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 LEO1Q8WVC0 666 aaPredicted RBP19.85■□□□□ 0.77
CTSB-233ENST00000534636 ZFYVE19Q96K21 471 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 ACBD6Q9BR61 282 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 PI4K2AQ9BTU6 479 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 IL21Q9HBE4 155 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 ABCB6Q9NP58 842 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 UXTQ9UBK9 157 aaPredicted RBP19.85■□□□□ 0.77
CTSB-233ENST00000534636 GMEB2Q9UKD1 530 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 L1RE1Q9UN81 338 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 SNX9Q9Y5X1 595 aa19.85■□□□□ 0.77
CTSB-233ENST00000534636 TNNC2P02585 160 aa19.84■□□□□ 0.77
CTSB-233ENST00000534636 PCSK1P29120 753 aa19.84■□□□□ 0.77
CTSB-233ENST00000534636 LHX1P48742 406 aa19.84■□□□□ 0.77
CTSB-233ENST00000534636 RPL10AP62906 217 aaKnown RBP19.84■□□□□ 0.77
CTSB-233ENST00000534636 SURF1Q15526 300 aa19.84■□□□□ 0.77
CTSB-233ENST00000534636 INTS6LQ5JSJ4 861 aaKnown RBP19.84■□□□□ 0.77
CTSB-233ENST00000534636 DGKKQ5KSL6 1271 aa19.84■□□□□ 0.77
CTSB-233ENST00000534636 ADGRF2Q8IZF7 708 aa19.84■□□□□ 0.77
CTSB-233ENST00000534636 CMTM8Q8IZV2 173 aa19.84■□□□□ 0.77
CTSB-233ENST00000534636 SPEM1Q8N4L4 309 aa19.84■□□□□ 0.77
CTSB-233ENST00000534636 TOP6BLQ8N6T0 577 aa19.84■□□□□ 0.77
CTSB-233ENST00000534636 LINC00301Q8NCQ3 95 aa19.84■□□□□ 0.77
CTSB-233ENST00000534636 TTC8Q8TAM2 541 aa19.84■□□□□ 0.77
CTSB-233ENST00000534636 MRPS31Q92665 395 aaKnown RBP19.84■□□□□ 0.77
CTSB-233ENST00000534636 RMDN1Q96DB5 314 aa19.84■□□□□ 0.77
CTSB-233ENST00000534636 FGFBP2Q9BYJ0 223 aa19.84■□□□□ 0.77
CTSB-233ENST00000534636 KIF9Q9HAQ2 790 aa19.84■□□□□ 0.77
CTSB-233ENST00000534636 PDE11AQ9HCR9 933 aa19.84■□□□□ 0.77
CTSB-233ENST00000534636 GTSE1Q9NYZ3 720 aa19.84■□□□□ 0.77
CTSB-233ENST00000534636 MAGED2Q9UNF1 606 aaPredicted RBP19.84■□□□□ 0.77
CTSB-233ENST00000534636 ZNF233A6NK53 670 aa19.83■□□□□ 0.77
CTSB-233ENST00000534636 PPP6R2O75170 966 aa19.83■□□□□ 0.77
CTSB-233ENST00000534636 NLRP12P59046 1061 aa19.83■□□□□ 0.77
CTSB-233ENST00000534636 ASIC1P78348 528 aa19.83■□□□□ 0.77
CTSB-233ENST00000534636 ITPRIPL2Q3MIP1 535 aa19.83■□□□□ 0.77
CTSB-233ENST00000534636 MAB21L3Q8N8X9 362 aa19.83■□□□□ 0.77
CTSB-233ENST00000534636 BACH2Q9BYV9 841 aa19.83■□□□□ 0.77
CTSB-233ENST00000534636 SMG9Q9H0W8 520 aaKnown RBP19.83■□□□□ 0.77
CTSB-233ENST00000534636 TMLHEQ9NVH6 421 aa19.83■□□□□ 0.77
CTSB-233ENST00000534636 GDAP2Q9NXN4 497 aa19.83■□□□□ 0.77
CTSB-233ENST00000534636 TDGF1P13385 188 aa19.82■□□□□ 0.76
CTSB-233ENST00000534636 ACAT1P24752 427 aaKnown RBP19.82■□□□□ 0.76
CTSB-233ENST00000534636 SATB1Q01826 763 aa19.82■□□□□ 0.76
CTSB-233ENST00000534636 PUM1Q14671 1186 aaKnown RBP eCLIP19.82■□□□□ 0.76
CTSB-233ENST00000534636 PON2Q15165 354 aa19.82■□□□□ 0.76
CTSB-233ENST00000534636 CC2D1AQ6P1N0 951 aaPredicted RBP19.82■□□□□ 0.76
CTSB-233ENST00000534636 DGLUCYQ7Z3D6 616 aa19.82■□□□□ 0.76
CTSB-233ENST00000534636 SPATA2LQ8IUW3 424 aaPredicted RBP19.82■□□□□ 0.76
CTSB-233ENST00000534636 IQUBQ8NA54 791 aa19.82■□□□□ 0.76
CTSB-233ENST00000534636 DHX58Q96C10 678 aa19.82■□□□□ 0.76
CTSB-233ENST00000534636 LRRC3BQ96PB8 259 aa19.82■□□□□ 0.76
CTSB-233ENST00000534636 SLC46A2Q9BY10 475 aa19.82■□□□□ 0.76
CTSB-233ENST00000534636 TRIM9Q9C026 710 aa19.82■□□□□ 0.76
CTSB-233ENST00000534636 KIAA1586Q9HCI6 787 aa19.82■□□□□ 0.76
CTSB-233ENST00000534636 RBM12Q9NTZ6 932 aaKnown RBP19.82■□□□□ 0.76
CTSB-233ENST00000534636 SOBPA7XYQ1 873 aa19.81■□□□□ 0.76
CTSB-233ENST00000534636 EIF3DO15371 548 aaKnown RBP eCLIP19.81■□□□□ 0.76
CTSB-233ENST00000534636 YEATS4O95619 227 aa19.81■□□□□ 0.76
CTSB-233ENST00000534636 HSP90AA1P07900 732 aaKnown RBP19.81■□□□□ 0.76
CTSB-233ENST00000534636 GPR15P49685 360 aa19.81■□□□□ 0.76
CTSB-233ENST00000534636 TNK2Q07912 1038 aa19.81■□□□□ 0.76
CTSB-233ENST00000534636 LMBRD2Q68DH5 695 aaPredicted RBP19.81■□□□□ 0.76
CTSB-233ENST00000534636 TXNDC11Q6PKC3 985 aa19.81■□□□□ 0.76
CTSB-233ENST00000534636 SYNPOQ8N3V7 929 aa19.81■□□□□ 0.76
CTSB-233ENST00000534636 MAGEF1Q9HAY2 307 aa19.81■□□□□ 0.76
CTSB-233ENST00000534636 INTS13Q9NVM9 706 aa19.81■□□□□ 0.76
CTSB-233ENST00000534636 KBTBD4Q9NVX7 518 aa19.81■□□□□ 0.76
CTSB-233ENST00000534636 HSPBP1Q9NZL4 362 aa19.81■□□□□ 0.76
CTSB-233ENST00000534636 SIX4Q9UIU6 781 aa19.81■□□□□ 0.76
CTSB-233ENST00000534636 CUTAO60888 179 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 HMGA1P17096 107 aaKnown RBP19.8■□□□□ 0.76
CTSB-233ENST00000534636 SDHBP21912 280 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 CYP2F1P24903 491 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 AMPD2Q01433 879 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 E2F4Q16254 413 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 DUOXA2Q1HG44 320 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 CFAP221Q4G0U5 840 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 SDHAF4Q5VUM1 108 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 C4orf50Q6ZRC1 276 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 PRR23BQ6ZRT6 265 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 WDR49Q8IV35 697 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 FSIP1Q8NA03 581 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 STKLD1Q8NE28 680 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 FUBP3Q96I24 572 aaKnown RBP eCLIP19.8■□□□□ 0.76
CTSB-233ENST00000534636 HPDLQ96IR7 371 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 FAM84AQ96KN4 292 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 TDP1Q9NUW8 608 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 GTF3C4Q9UKN8 822 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 USP18Q9UMW8 372 aa19.8■□□□□ 0.76
CTSB-233ENST00000534636 UBE4BO95155 1302 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms