RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 C1orf228Q6PIY5 440 aa23.07■■□□□ 1.28
GSDMD-216ENST00000534602 HS2ST1Q7LGA3 356 aa23.07■■□□□ 1.28
GSDMD-216ENST00000534602 LIMS2Q7Z4I7 341 aa23.07■■□□□ 1.28
GSDMD-216ENST00000534602 OR5B17Q8NGF7 314 aa23.07■■□□□ 1.28
GSDMD-216ENST00000534602 RSPRY1Q96DX4 576 aa23.07■■□□□ 1.28
GSDMD-216ENST00000534602 PKMYT1Q99640 499 aa23.07■■□□□ 1.28
GSDMD-216ENST00000534602 COL4A2P08572 1712 aa23.07■■□□□ 1.28
GSDMD-216ENST00000534602 CFAP54Q96N23 3096 aa23.07■■□□□ 1.28
GSDMD-216ENST00000534602 PTPRJQ12913 1337 aa23.07■■□□□ 1.28
GSDMD-216ENST00000534602 GVINP1Q7Z2Y8 2422 aa23.06■■□□□ 1.28
GSDMD-216ENST00000534602 PRPF40AO75400 957 aaKnown RBP23.06■■□□□ 1.28
GSDMD-216ENST00000534602 SLFN14P0C7P3 912 aa23.06■■□□□ 1.28
GSDMD-216ENST00000534602 PCSK1P29120 753 aa23.06■■□□□ 1.28
GSDMD-216ENST00000534602 SOWAHAQ2M3V2 549 aa23.06■■□□□ 1.28
GSDMD-216ENST00000534602 C12orf56Q8IXR9 622 aa23.06■■□□□ 1.28
GSDMD-216ENST00000534602 CEP57L1Q8IYX8 460 aa23.06■■□□□ 1.28
GSDMD-216ENST00000534602 ADGRF2Q8IZF7 708 aa23.06■■□□□ 1.28
GSDMD-216ENST00000534602 GIPC2Q8TF65 315 aa23.06■■□□□ 1.28
GSDMD-216ENST00000534602 HPDLQ96IR7 371 aa23.06■■□□□ 1.28
GSDMD-216ENST00000534602 FAM84AQ96KN4 292 aa23.06■■□□□ 1.28
GSDMD-216ENST00000534602 IER2Q9BTL4 223 aa23.06■■□□□ 1.28
GSDMD-216ENST00000534602 BLZF1Q9H2G9 400 aa23.06■■□□□ 1.28
GSDMD-216ENST00000534602 PIAS3Q9Y6X2 628 aa23.06■■□□□ 1.28
GSDMD-216ENST00000534602 NUP210Q8TEM1 1887 aaPredicted RBP23.05■■□□□ 1.28
GSDMD-216ENST00000534602 DPYSL4O14531 572 aa23.05■■□□□ 1.28
GSDMD-216ENST00000534602 HMGA1P17096 107 aaKnown RBP23.05■■□□□ 1.28
GSDMD-216ENST00000534602 RPL10AP62906 217 aaKnown RBP23.05■■□□□ 1.28
GSDMD-216ENST00000534602 PSMD6Q15008 389 aa23.05■■□□□ 1.28
GSDMD-216ENST00000534602 CFAP221Q4G0U5 840 aa23.05■■□□□ 1.28
GSDMD-216ENST00000534602 ARHGAP29Q52LW3 1261 aa23.05■■□□□ 1.28
GSDMD-216ENST00000534602 LMBRD2Q68DH5 695 aaPredicted RBP23.05■■□□□ 1.28
GSDMD-216ENST00000534602 MAMSTRQ6ZN01 415 aa23.05■■□□□ 1.28
GSDMD-216ENST00000534602 XXYLT1Q8NBI6 393 aa23.05■■□□□ 1.28
GSDMD-216ENST00000534602 CSGALNACT1Q8TDX6 532 aa23.05■■□□□ 1.28
GSDMD-216ENST00000534602 FAM3CQ92520 227 aa23.05■■□□□ 1.28
GSDMD-216ENST00000534602 FUBP3Q96I24 572 aaKnown RBP eCLIP23.05■■□□□ 1.28
GSDMD-216ENST00000534602 ZNF292O60281 2723 aa23.04■■□□□ 1.28
GSDMD-216ENST00000534602 PATJQ8NI35 1801 aa23.04■■□□□ 1.28
GSDMD-216ENST00000534602 LMNAP02545 664 aaKnown RBP23.04■■□□□ 1.28
GSDMD-216ENST00000534602 CSH1P0DML2 217 aa23.04■■□□□ 1.28
GSDMD-216ENST00000534602 CSH2P0DML3 217 aa23.04■■□□□ 1.28
GSDMD-216ENST00000534602 DDX6P26196 483 aaKnown RBP eCLIP23.04■■□□□ 1.28
GSDMD-216ENST00000534602 CASP1P29466 404 aa23.04■■□□□ 1.28
GSDMD-216ENST00000534602 AFMP43652 599 aa23.04■■□□□ 1.28
GSDMD-216ENST00000534602 CDR1P51861 262 aa23.04■■□□□ 1.28
GSDMD-216ENST00000534602 CUL4BQ13620 913 aa23.04■■□□□ 1.28
GSDMD-216ENST00000534602 OSTM1Q86WC4 334 aa23.04■■□□□ 1.28
GSDMD-216ENST00000534602 SPRYD3Q8NCJ5 442 aa23.04■■□□□ 1.28
GSDMD-216ENST00000534602 PI4K2AQ9BTU6 479 aa23.04■■□□□ 1.28
GSDMD-216ENST00000534602 C8orf33Q9H7E9 229 aaPredicted RBP23.04■■□□□ 1.28
GSDMD-216ENST00000534602 GTF3C4Q9UKN8 822 aa23.04■■□□□ 1.28
GSDMD-216ENST00000534602 R4GN57 208 aa23.04■■□□□ 1.28
GSDMD-216ENST00000534602 FANCMQ8IYD8 2048 aa23.04■■□□□ 1.28
GSDMD-216ENST00000534602 TICRRQ7Z2Z1 1910 aa23.04■■□□□ 1.28
GSDMD-216ENST00000534602 F11P03951 625 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 FAM163BP0C2L3 166 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 ACAT1P24752 427 aaKnown RBP23.03■■□□□ 1.28
GSDMD-216ENST00000534602 NLRP12P59046 1061 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 CYP4F8P98187 520 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 PLCB2Q00722 1185 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 CYP24A1Q07973 514 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 KNOP1Q1ED39 458 aaKnown RBP23.03■■□□□ 1.28
GSDMD-216ENST00000534602 FAM171BQ6P995 826 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 TRAPPC11Q7Z392 1133 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 TMEM150AQ86TG1 271 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 NELFCDQ8IXH7 590 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 ADSSL1Q8N142 457 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 GOLGA5Q8TBA6 731 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 LRRC3BQ96PB8 259 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 FNBP1Q96RU3 617 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 SLC46A2Q9BY10 475 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 SLC39A2Q9NP94 309 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 USP25Q9UHP3 1055 aa23.03■■□□□ 1.28
GSDMD-216ENST00000534602 CLIC2O15247 247 aa23.02■■□□□ 1.28
GSDMD-216ENST00000534602 PRAMEF12O95522 483 aa23.02■■□□□ 1.28
GSDMD-216ENST00000534602 TNNI1P19237 187 aa23.02■■□□□ 1.28
GSDMD-216ENST00000534602 CMA1P23946 247 aa23.02■■□□□ 1.28
GSDMD-216ENST00000534602 CYP2F1P24903 491 aa23.02■■□□□ 1.28
GSDMD-216ENST00000534602 CYP2J2P51589 502 aa23.02■■□□□ 1.28
GSDMD-216ENST00000534602 MAPRE1Q15691 268 aaKnown RBP23.02■■□□□ 1.28
GSDMD-216ENST00000534602 CMTM8Q8IZV2 173 aa23.02■■□□□ 1.28
GSDMD-216ENST00000534602 CELF5Q8N6W0 485 aaKnown RBP23.02■■□□□ 1.28
GSDMD-216ENST00000534602 RDH13Q8NBN7 331 aa23.02■■□□□ 1.28
GSDMD-216ENST00000534602 BPIFB1Q8TDL5 484 aa23.02■■□□□ 1.28
GSDMD-216ENST00000534602 KBTBD7Q8WVZ9 684 aa23.02■■□□□ 1.28
GSDMD-216ENST00000534602 TRMT2BQ96GJ1 504 aaKnown RBP23.02■■□□□ 1.28
GSDMD-216ENST00000534602 MYRFLQ96LU7 910 aa23.02■■□□□ 1.28
GSDMD-216ENST00000534602 CGRRF1Q99675 332 aa23.02■■□□□ 1.28
GSDMD-216ENST00000534602 CHRDQ9H2X0 955 aa23.02■■□□□ 1.28
GSDMD-216ENST00000534602 UXTQ9UBK9 157 aaPredicted RBP23.02■■□□□ 1.28
GSDMD-216ENST00000534602 SERTAD1Q9UHV2 236 aa23.02■■□□□ 1.28
GSDMD-216ENST00000534602 CDH9Q9ULB4 789 aa23.02■■□□□ 1.28
GSDMD-216ENST00000534602 NDRG2Q9UN36 371 aaKnown RBP23.02■■□□□ 1.28
GSDMD-216ENST00000534602 EP300Q09472 2414 aaPredicted RBP23.01■■□□□ 1.27
GSDMD-216ENST00000534602 ACTN4O43707 911 aaKnown RBP23.01■■□□□ 1.27
GSDMD-216ENST00000534602 NOL4O94818 638 aa23.01■■□□□ 1.27
GSDMD-216ENST00000534602 MYL1P05976 194 aa23.01■■□□□ 1.27
GSDMD-216ENST00000534602 DLATP10515 647 aaKnown RBP23.01■■□□□ 1.27
GSDMD-216ENST00000534602 WARSP23381 471 aaKnown RBP23.01■■□□□ 1.27
GSDMD-216ENST00000534602 MAGEA11P43364 429 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms