RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 STRA6Q9BX79 667 aa9.04□□□□□ -0.96
RPUSD4-209ENST00000534393 SLC46A2Q9BY10 475 aa9.04□□□□□ -0.96
RPUSD4-209ENST00000534393 TMEM206Q9H813 350 aa9.04□□□□□ -0.96
RPUSD4-209ENST00000534393 KIF9Q9HAQ2 790 aa9.04□□□□□ -0.96
RPUSD4-209ENST00000534393 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
RPUSD4-209ENST00000534393 ABCB6Q9NP58 842 aa9.04□□□□□ -0.96
RPUSD4-209ENST00000534393 OLFML3Q9NRN5 406 aa9.04□□□□□ -0.96
RPUSD4-209ENST00000534393 TDP1Q9NUW8 608 aa9.04□□□□□ -0.96
RPUSD4-209ENST00000534393 ABI2Q9NYB9 513 aaPredicted RBP9.04□□□□□ -0.96
RPUSD4-209ENST00000534393 GTSE1Q9NYZ3 720 aa9.04□□□□□ -0.96
RPUSD4-209ENST00000534393 ATP6V1DQ9Y5K8 247 aa9.04□□□□□ -0.96
RPUSD4-209ENST00000534393 SRPRBQ9Y5M8 271 aaKnown RBP9.04□□□□□ -0.96
RPUSD4-209ENST00000534393 EML5Q05BV3 1969 aa9.04□□□□□ -0.96
RPUSD4-209ENST00000534393 NCANO14594 1321 aa9.04□□□□□ -0.96
RPUSD4-209ENST00000534393 PTPRDP23468 1912 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 MYH10P35580 1976 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 CHURC1-FNTBB4DL54 471 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 KIAA0391O15091 583 aaKnown RBP9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 PPP1R37O75864 691 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 GCNT3O95395 438 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 PRAMEF12O95522 483 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 TGM1P22735 817 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 PCSK1P29120 753 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 ADSSP30520 456 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 SOX9P48436 509 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 LHX1P48742 406 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 FNTBP49356 437 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 ATXN1P54253 815 aaKnown RBP9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 NLRP12P59046 1061 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 CYP4F8P98187 520 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 TFAMQ00059 246 aaKnown RBP9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 GRIN1Q05586 938 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 SPEM2Q0P670 501 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 GRSF1Q12849 480 aaKnown RBP eCLIP9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 GAS6Q14393 721 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 PON2Q15165 354 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 CSRP2Q16527 193 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 L1TD1Q5T7N2 865 aaKnown RBP9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 DPH6Q7L8W6 267 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 LRRTM3Q86VH5 581 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 MON1AQ86VX9 555 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 GPIHBP1Q8IV16 184 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 BRSK2Q8IWQ3 736 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 EFCAB13Q8IY85 973 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 SYCP3Q8IZU3 236 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 TMEM130Q8N3G9 435 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 NETO1Q8TDF5 533 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 GIPC2Q8TF65 315 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 LEO1Q8WVC0 666 aaPredicted RBP9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 ZFYVE19Q96K21 471 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 LRRC3BQ96PB8 259 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 LPIN3Q9BQK8 851 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 FAM83CQ9BQN1 747 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 FAM213AQ9BRX8 229 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 LRRC27Q9C0I9 530 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 GKN1Q9NS71 199 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 ITGA11Q9UKX5 1188 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 MORC2Q9Y6X9 1032 aaPredicted RBP9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 EPG5Q9HCE0 2579 aa9.03□□□□□ -0.96
RPUSD4-209ENST00000534393 MYO16Q9Y6X6 1858 aa9.02□□□□□ -0.96
RPUSD4-209ENST00000534393 NUP205Q92621 2012 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 MYO18AQ92614 2054 aaKnown RBP9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 TISP43B9A030 160 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 GOLGA6L22H0YM25 854 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 K7ESF4 209 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 TRDMT1O14717 391 aaKnown RBP9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 HRO43593 1189 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 EXTL3O43909 919 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 PRPF40AO75400 957 aaKnown RBP9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 F11P03951 625 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 ITGB3P05106 788 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 IDEP14735 1019 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 HMGA1P17096 107 aaKnown RBP9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 DRD1P21728 446 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 POLR2BP30876 1174 aaKnown RBP9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 STAT6P42226 847 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 RBP5P82980 135 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 TNK2Q07912 1038 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 MYO1EQ12965 1108 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 RUNX3Q13761 415 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 ZNF268Q14587 947 aaPredicted RBP9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 PDGFRLQ15198 375 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 SURF1Q15526 300 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 LPAL2Q16609 132 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 FBXO43Q4G163 708 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 TMEM196Q5HYL7 178 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 TXNDC11Q6PKC3 985 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 CLEC17AQ6ZS10 378 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 CEP68Q76N32 757 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 WDR5BQ86VZ2 330 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 CCDC65Q8IXS2 484 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 PDCL2Q8N4E4 241 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 CAMKK1Q8N5S9 505 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 CSGALNACT2Q8N6G5 542 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 TOP6BLQ8N6T0 577 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 MAB21L3Q8N8X9 362 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 FSIP1Q8NA03 581 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 CCDC26Q8TAB7 109 aa9.02□□□□□ -0.97
RPUSD4-209ENST00000534393 DDX1Q92499 740 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms