RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 KLHL42Q9P2K6 505 aa4.98□□□□□ -1.61
ATPAF1-211ENST00000534216 ADGRA2Q96PE1 1338 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 CCDC151A5D8V7 595 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 FAM227AF5H4B4 570 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 PPM1GO15355 546 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 PHGDHO43175 533 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 THP07101 528 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 RHOP08100 348 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 ATXN1LP0C7T5 689 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 VIPR2P41587 438 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 GRIA3P42263 894 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 PTH2RP49190 550 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 SLC11A2P49281 568 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 CACNA2D1P54289 1103 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 UCP3P55916 312 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 IQCB1Q15051 598 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 ZNF362Q5T0B9 420 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 SWSAP1Q6NVH7 229 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 MAEAQ7L5Y9 396 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 PEG10Q86TG7 708 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 PRIMA1Q86XR5 153 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 MYO1HQ8N1T3 1032 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 FAM136AQ96C01 138 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 CRAMP1Q96RY5 1269 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 NELL2Q99435 816 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 XPR1Q9UBH6 696 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 TMX2Q9Y320 296 aa4.97□□□□□ -1.61
ATPAF1-211ENST00000534216 CAPN8A6NHC0 703 aa4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 A6NNZ2 444 aa4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 KITP10721 976 aa4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 LOXL3P58215 753 aa4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 LAYNQ6UX15 382 aa4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 ADGRG3Q86Y34 549 aa4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 FAM98AQ8NCA5 519 aaKnown RBP4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 IL31RAQ8NI17 732 aa4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 FKBP10Q96AY3 582 aa4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 MOGAT1Q96PD6 335 aa4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 ALG8Q9BVK2 526 aa4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 DPH1Q9BZG8 443 aa4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 R3HDMLQ9H3Y0 253 aa4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 FAM204AQ9H8W3 233 aa4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 KIAA1586Q9HCI6 787 aa4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 DDX20Q9UHI6 824 aaKnown RBP4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 L1RE1Q9UN81 338 aa4.96□□□□□ -1.62
ATPAF1-211ENST00000534216 COL11A2P13942 1736 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 A0A087WWL8 130 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 GOLGA6CA6NDK9 693 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 GOLGA6BA6NDN3 693 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 VSTM5A8MXK1 200 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 OVOL3O00110 214 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 ORC4O43929 436 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 PPFIA2O75334 1257 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 ELFN1P0C7U0 828 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 GOLGA6DP0CG33 693 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 PXNP49023 591 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 LILRA4P59901 499 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 LLGL1Q15334 1064 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 CNN3Q15417 329 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 SFRP4Q6FHJ7 346 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 FBXO42Q6P3S6 717 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 ZNF783Q6ZMS7 281 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 DNAJC5GQ8N7S2 189 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 OR6B3Q8NGW1 331 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 ANKS1AQ92625 1134 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 RFKQ969G6 155 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 PBKQ96KB5 322 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 PTDSS2Q9BVG9 487 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 C22orf23Q9BZE7 217 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 METTL14Q9HCE5 456 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 SERHLQ9NQF3 203 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 GOLGA6AQ9NYA3 693 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 SLC17A6Q9P2U8 582 aa4.95□□□□□ -1.62
ATPAF1-211ENST00000534216 LINC00473A8K010 186 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 MYO1CO00159 1063 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 MYO1FO00160 1098 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 BTN3A1O00481 513 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 PPM1DO15297 605 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 PDHA1P08559 390 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 EN2P19622 333 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 PPIFP30405 207 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 SLC7A1P30825 629 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 WNT3P56703 355 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 CTBP1Q13363 440 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 TBCCQ15814 346 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 ICE2Q659A1 982 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 LMBRD2Q68DH5 695 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 GRASPQ7Z6J2 395 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 C14orf80Q86SX3 495 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 SLC15A4Q8N697 577 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 TTC8Q8TAM2 541 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 BBC3Q96PG8 261 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 KLK15Q9H2R5 256 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 IL17RBQ9NRM6 502 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 SEMA4GQ9NTN9 838 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 EHD3Q9NZN3 535 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 DKK3Q9UBP4 350 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 SHOC2Q9UQ13 582 aa4.94□□□□□ -1.62
ATPAF1-211ENST00000534216 SSX2IPQ9Y2D8 614 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms