RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 KCNA1Q09470 495 aa18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 BFSP1Q12934 665 aa18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 L1TD1Q5T7N2 865 aaKnown RBP18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 TMEM150AQ86TG1 271 aa18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 NETO1Q8TDF5 533 aa18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 MRPS31Q92665 395 aaKnown RBP18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 FAM83CQ9BQN1 747 aa18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 PI4K2AQ9BTU6 479 aa18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 SEMA4GQ9NTN9 838 aa18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 TMLHEQ9NVH6 421 aa18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 FBXO2Q9UK22 296 aaPredicted RBP18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 MAGED2Q9UNF1 606 aaPredicted RBP18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 AGAP1Q9UPQ3 857 aa18.16■□□□□ 0.5
CAPRIN1-216ENST00000534042 MYMKA6NI61 221 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 HUS1O60921 280 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 GCNT3O95395 438 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 LDHAP00338 332 aaKnown RBP18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 ITGB3P05106 788 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 PDCP20941 246 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 GPR15P49685 360 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 WNT7BP56706 349 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 RUNX3Q13761 415 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 WDR5BQ86VZ2 330 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 BRSK2Q8IWQ3 736 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 SYCP3Q8IZU3 236 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 PDCL2Q8N4E4 241 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 USP13Q92995 863 aaPredicted RBP18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 DNAJC19Q96DA6 116 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 SAAL1Q96ER3 474 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 KIF9Q9HAQ2 790 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 TDP1Q9NUW8 608 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 PCDHB13Q9Y5F0 798 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 SRPRBQ9Y5M8 271 aaKnown RBP18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 OBSL1O75147 1896 aa18.15■□□□□ 0.5
CAPRIN1-216ENST00000534042 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 SOBPA7XYQ1 873 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 IDEP14735 1019 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 RPL10AP62906 217 aaKnown RBP18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 AMPD2Q01433 879 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 MYL7Q01449 175 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 GRSF1Q12849 480 aaKnown RBP eCLIP18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 CSRP2Q16527 193 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 SDHAF4Q5VUM1 108 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 TXNDC8Q6A555 127 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 CC2D1AQ6P1N0 951 aaPredicted RBP18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 PRR23CQ6ZRP0 262 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 MON1AQ86VX9 555 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 FAM160A2Q8N612 972 aaPredicted RBP18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 C1orf127Q8N9H9 656 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 ZSWIM2Q8NEG5 633 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 LEO1Q8WVC0 666 aaPredicted RBP18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 CLIC6Q96NY7 704 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 ACBD6Q9BR61 282 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 EBF3Q9H4W6 596 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 HPS4Q9NQG7 708 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 DDX43Q9NXZ2 648 aaKnown RBP18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 RBAKQ9NYW8 714 aaPredicted RBP18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 UXTQ9UBK9 157 aaPredicted RBP18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 L1RE1Q9UN81 338 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 CCL26Q9Y258 94 aa18.14■□□□□ 0.49
CAPRIN1-216ENST00000534042 ACACBO00763 2458 aa18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 SLC30A4O14863 429 aa18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 EXTL3O43909 919 aa18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 ATG13O75143 517 aa18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 GARTP22102 1010 aa18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 HOXC13P31276 330 aa18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 ALCAMQ13740 583 aa18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 TMEM196Q5HYL7 178 aa18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 INTS6LQ5JSJ4 861 aaKnown RBP18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 TRIM68Q6AZZ1 485 aa18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 FSTL4Q6MZW2 842 aa18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 TMEM86AQ8N2M4 240 aa18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 CSGALNACT2Q8N6G5 542 aa18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 LRRC52Q8N7C0 313 aa18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 STKLD1Q8NE28 680 aa18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 NOC3LQ8WTT2 800 aaKnown RBP18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 ABCB6Q9NP58 842 aa18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 OLFML3Q9NRN5 406 aa18.13■□□□□ 0.49
CAPRIN1-216ENST00000534042 GOLGA8IPA6NC78 632 aa18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 GOLGA8JA6NMD2 632 aa18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 TRDMT1O14717 391 aaKnown RBP18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 FOXD2O60548 495 aaPredicted RBP18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 KRT19P08727 400 aa18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 ACAT1P24752 427 aaKnown RBP18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 CYP2F1P24903 491 aa18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 CASP5P51878 434 aa18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 RBP5P82980 135 aa18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 CEBPZQ03701 1054 aaKnown RBP18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 CUL4AQ13619 759 aa18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 ZNF268Q14587 947 aaPredicted RBP18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 DDR2Q16832 855 aa18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 PKN3Q6P5Z2 889 aa18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 CCDC73Q6ZRK6 1079 aa18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 GDAP2Q9NXN4 497 aa18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 GTF3C4Q9UKN8 822 aa18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 ITGA11Q9UKX5 1188 aa18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 SLC8A2Q9UPR5 921 aa18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 SNX9Q9Y5X1 595 aa18.12■□□□□ 0.49
CAPRIN1-216ENST00000534042 GREB1Q4ZG55 1949 aa18.11■□□□□ 0.49
CAPRIN1-216ENST00000534042 DNAH14Q0VDD8 3507 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms