RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 VNN1O95497 513 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 VNN2O95498 520 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 FGFR1OPO95684 399 aaKnown RBP14.3□□□□□ -0.12
CAPN1-227ENST00000533909 FAM163BP0C2L3 166 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 HAPLN1P10915 354 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-227ENST00000533909 CD44P16070 742 aaKnown RBP14.3□□□□□ -0.12
CAPN1-227ENST00000533909 MXI1P50539 228 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 PMS1P54277 932 aaKnown RBP14.3□□□□□ -0.12
CAPN1-227ENST00000533909 CYP27A1Q02318 531 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 TDGQ13569 410 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 SCN4BQ8IWT1 228 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 TTC9BQ8N6N2 239 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 NXPE3Q969Y0 559 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 MCRS1Q96EZ8 462 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 CEP63Q96MT8 703 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 XYLT2Q9H1B5 865 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 SMYD3Q9H7B4 428 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 VRTNQ9H8Y1 702 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 METTL14Q9HCE5 456 aaKnown RBP14.3□□□□□ -0.12
CAPN1-227ENST00000533909 ABCB6Q9NP58 842 aa14.3□□□□□ -0.12
CAPN1-227ENST00000533909 AVENQ9NQS1 362 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-227ENST00000533909 MAGEC2Q9UBF1 373 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-227ENST00000533909 MYBPHLA2RUH7 354 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 PPP1R3GB7ZBB8 358 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 HCRTO43612 131 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 CEBPBP17676 345 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 LMO2P25791 158 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 ANXA13P27216 316 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 RAP1GAPP47736 663 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 STX17P56962 302 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 PPP3CAQ08209 521 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 SLC5A9Q2M3M2 681 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 ARHGAP15Q53QZ3 475 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 MDH1BQ5I0G3 518 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 WDR44Q5JSH3 913 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 C1orf220Q5T0J3 134 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 TRIM67Q6ZTA4 783 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 LIMS2Q7Z4I7 341 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 DNAJB7Q7Z6W7 309 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-227ENST00000533909 NPAS3Q8IXF0 933 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 HS6ST3Q8IZP7 471 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 TAS1R2Q8TE23 839 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 GIPC2Q8TF65 315 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 PSMG2Q969U7 264 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 FUBP3Q96I24 572 aaKnown RBP eCLIP14.29□□□□□ -0.12
CAPN1-227ENST00000533909 TNIP3Q96KP6 325 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 LPIN3Q9BQK8 851 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 TMLHEQ9NVH6 421 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 FBXL21Q9UKT6 434 aa14.29□□□□□ -0.12
CAPN1-227ENST00000533909 ATP8B3O60423 1300 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 GPR37L1O60883 481 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 ATP2C2O75185 946 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 MICAL2O94851 1124 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 ASS1P00966 412 aaKnown RBP14.28□□□□□ -0.12
CAPN1-227ENST00000533909 BMP6P22004 513 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 CYP2F1P24903 491 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 NOP14P78316 857 aaKnown RBP14.28□□□□□ -0.12
CAPN1-227ENST00000533909 SIGLEC14Q08ET2 396 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 CETN1Q12798 172 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 TPD52L1Q16890 204 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-227ENST00000533909 FRMD5Q7Z6J6 570 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 FBXL13Q8NEE6 735 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 MYCBPAPQ8TBZ2 947 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 GPR152Q8TDT2 470 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 RSAD2Q8WXG1 361 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 MYLPFQ96A32 169 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 ELMO3Q96BJ8 720 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 TCEAL4Q96EI5 215 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 ATXN3LQ9H3M9 355 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 LMBRD1Q9NUN5 540 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 DACH1Q9UI36 760 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 MAGED2Q9UNF1 606 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-227ENST00000533909 NUMBLQ9Y6R0 609 aa14.28□□□□□ -0.12
CAPN1-227ENST00000533909 A0A1W2PRU2 124 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 GNA14O95837 355 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 CSH1P0DML2 217 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 CSH2P0DML3 217 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 PTPN1P18031 435 aaKnown RBP14.27□□□□□ -0.13
CAPN1-227ENST00000533909 ATF6P18850 670 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 RFX1P22670 979 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 GABRR2P28476 465 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 CDC25CP30307 473 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 GRIK1P39086 918 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 EPHA5P54756 1037 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 CDH8P55286 799 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 HTR4Q13639 388 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 TEAD2Q15562 447 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 DDR2Q16832 855 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 CFAP221Q4G0U5 840 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 PRSS36Q5K4E3 855 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 SPOPLQ6IQ16 392 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 TTI2Q6NXR4 508 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 VSTM1Q6UX27 236 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 FILIP1Q7Z7B0 1213 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 CREBRFQ8IUR6 639 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 ZC3H3Q8IXZ2 948 aaKnown RBP14.27□□□□□ -0.13
CAPN1-227ENST00000533909 MLKLQ8NB16 471 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 B3GALNT2Q8NCR0 500 aa14.27□□□□□ -0.13
CAPN1-227ENST00000533909 ST13P5Q8NFI4 369 aaPredicted RBP14.27□□□□□ -0.13
CAPN1-227ENST00000533909 MED10Q9BTT4 135 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms