RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 USP46P62068 366 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 PSMC1P62191 440 aaKnown RBP11.05□□□□□ -0.64
CLP1-206ENST00000533905 GAB4Q2WGN9 574 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 BRSK2Q8IWQ3 736 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 FAM160A2Q8N612 972 aaPredicted RBP11.05□□□□□ -0.64
CLP1-206ENST00000533905 TTC16Q8NEE8 873 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 FAM200AQ8TCP9 573 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 BPIFB1Q8TDL5 484 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 KBTBD7Q8WVZ9 684 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 POMGNT1Q8WZA1 660 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 CALML4Q96GE6 196 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 NELL2Q99435 816 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 MTMR12Q9C0I1 747 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 CCSER1Q9C0I3 900 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 TASP1Q9H6P5 420 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 PDE11AQ9HCR9 933 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 GKN1Q9NS71 199 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 GTF3C4Q9UKN8 822 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 MAGED2Q9UNF1 606 aaPredicted RBP11.05□□□□□ -0.64
CLP1-206ENST00000533905 AGAP1Q9UPQ3 857 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 MRPS17Q9Y2R5 130 aaKnown RBP11.05□□□□□ -0.64
CLP1-206ENST00000533905 C2CD2Q9Y426 696 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 EML5Q05BV3 1969 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 NBEAQ8NFP9 2946 aa11.05□□□□□ -0.64
CLP1-206ENST00000533905 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.04□□□□□ -0.64
CLP1-206ENST00000533905 FRMD3A2A2Y4 597 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 KPNA7A9QM74 516 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 CHRM1P11229 460 aaPredicted RBP11.04□□□□□ -0.64
CLP1-206ENST00000533905 CCR3P51677 355 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 TFAMQ00059 246 aaKnown RBP11.04□□□□□ -0.64
CLP1-206ENST00000533905 BFSP1Q12934 665 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 PKP1Q13835 747 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 L1TD1Q5T7N2 865 aaKnown RBP11.04□□□□□ -0.64
CLP1-206ENST00000533905 KBTBD6Q86V97 674 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 CBWD2Q8IUF1 395 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 YAF2Q8IY57 180 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 CMTM8Q8IZV2 173 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 SPEM1Q8N4L4 309 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 LEMD2Q8NC56 503 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 CSGALNACT1Q8TDX6 532 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 NOC3LQ8WTT2 800 aaKnown RBP11.04□□□□□ -0.64
CLP1-206ENST00000533905 CHAMP1Q96JM3 812 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 HHIPQ96QV1 700 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 ASB7Q9H672 318 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 ZDHHC4Q9NPG8 344 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 CRTAC1Q9NQ79 661 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 SEMA4GQ9NTN9 838 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 MAFFQ9ULX9 164 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 MTMR6Q9Y217 621 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 DERAQ9Y315 318 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 ZDHHC9Q9Y397 364 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 WNT6Q9Y6F9 365 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 DMXL2Q8TDJ6 3036 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 CHD6Q8TD26 2715 aa11.04□□□□□ -0.64
CLP1-206ENST00000533905 MAP1BP46821 2468 aaKnown RBP11.03□□□□□ -0.64
CLP1-206ENST00000533905 KIAA1549LQ6ZVL6 1849 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 NCAM2O15394 837 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 RNF40O75150 1001 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 PAPSS2O95340 614 aaPredicted RBP11.03□□□□□ -0.64
CLP1-206ENST00000533905 GCNT3O95395 438 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 PDIA4P13667 645 aaKnown RBP11.03□□□□□ -0.64
CLP1-206ENST00000533905 HNRNPLP14866 589 aaKnown RBP eCLIP11.03□□□□□ -0.64
CLP1-206ENST00000533905 PTMSP20962 102 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 SYT1P21579 422 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 USP4Q13107 963 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 SIM2Q14190 667 aaPredicted RBP11.03□□□□□ -0.64
CLP1-206ENST00000533905 ZNF77Q15935 545 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 SOWAHAQ2M3V2 549 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 TMEM196Q5HYL7 178 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 INTS6LQ5JSJ4 861 aaKnown RBP11.03□□□□□ -0.64
CLP1-206ENST00000533905 ARMCX5Q6P1M9 558 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 MAMSTRQ6ZN01 415 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 PRR23CQ6ZRP0 262 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 PDILTQ8N807 584 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 RASSF8Q8NHQ8 419 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 PLEKHO2Q8TD55 490 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 LINC00597Q9H2U6 94 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 DPEP3Q9H4B8 488 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 MRPL44Q9H9J2 332 aaKnown RBP11.03□□□□□ -0.64
CLP1-206ENST00000533905 DDX43Q9NXZ2 648 aaKnown RBP11.03□□□□□ -0.64
CLP1-206ENST00000533905 RBAKQ9NYW8 714 aaPredicted RBP11.03□□□□□ -0.64
CLP1-206ENST00000533905 RALYQ9UKM9 306 aaKnown RBP11.03□□□□□ -0.64
CLP1-206ENST00000533905 INVSQ9Y283 1065 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 ASB3Q9Y575 518 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 SRPRBQ9Y5M8 271 aaKnown RBP11.03□□□□□ -0.64
CLP1-206ENST00000533905 TCHHQ07283 1943 aa11.03□□□□□ -0.64
CLP1-206ENST00000533905 MYO16Q9Y6X6 1858 aa11.02□□□□□ -0.64
CLP1-206ENST00000533905 DENND4CQ5VZ89 1909 aa11.02□□□□□ -0.65
CLP1-206ENST00000533905 H0YCG3 227 aa11.02□□□□□ -0.65
CLP1-206ENST00000533905 AXIN1O15169 862 aa11.02□□□□□ -0.65
CLP1-206ENST00000533905 PRPF40AO75400 957 aaKnown RBP11.02□□□□□ -0.65
CLP1-206ENST00000533905 RUNX3Q13761 415 aa11.02□□□□□ -0.65
CLP1-206ENST00000533905 E2F4Q16254 413 aa11.02□□□□□ -0.65
CLP1-206ENST00000533905 ARHGAP29Q52LW3 1261 aa11.02□□□□□ -0.65
CLP1-206ENST00000533905 LAIR1Q6GTX8 287 aa11.02□□□□□ -0.65
CLP1-206ENST00000533905 LIMS2Q7Z4I7 341 aa11.02□□□□□ -0.65
CLP1-206ENST00000533905 BRAPQ7Z569 592 aa11.02□□□□□ -0.65
CLP1-206ENST00000533905 WDR5BQ86VZ2 330 aa11.02□□□□□ -0.65
CLP1-206ENST00000533905 LONP2Q86WA8 852 aa11.02□□□□□ -0.65
CLP1-206ENST00000533905 RALGPS2Q86X27 583 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms