RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.56□□□□□ -1.2
RNPC3-209ENST00000533834 NAALADL1Q9UQQ1 740 aa7.56□□□□□ -1.2
RNPC3-209ENST00000533834 PTPN22Q9Y2R2 807 aa7.56□□□□□ -1.2
RNPC3-209ENST00000533834 GBF1Q92538 1859 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 GOLGA6L10A0A0M3HER8 536 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 SPDYE5A6NIY4 337 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 CCT8L1PA6NM43 557 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 ACKR2O00590 384 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 DPYSL4O14531 572 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 OGTO15294 1046 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 GAS2O43903 313 aaKnown RBP7.55□□□□□ -1.2
RNPC3-209ENST00000533834 TMEM63AO94886 807 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 SSTR3P32745 418 aaPredicted RBP7.55□□□□□ -1.2
RNPC3-209ENST00000533834 HPDP32754 393 aaPredicted RBP7.55□□□□□ -1.2
RNPC3-209ENST00000533834 RFC1P35251 1148 aaPredicted RBP7.55□□□□□ -1.2
RNPC3-209ENST00000533834 LIG3P49916 1009 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 VCPP55072 806 aaKnown RBP7.55□□□□□ -1.2
RNPC3-209ENST00000533834 SGO2Q562F6 1265 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 PLEKHG4Q58EX7 1191 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 SPDYAQ5MJ70 313 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 ATG14Q6ZNE5 492 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 VSIG1Q86XK7 387 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 ARFGAP2Q8N6H7 521 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 CENPIQ92674 756 aaPredicted RBP7.55□□□□□ -1.2
RNPC3-209ENST00000533834 RNPEPQ9H4A4 650 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 CHD5Q8TDI0 1954 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 ZNF487B1APH4 448 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 KRT10P13645 584 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 BRD2P25440 801 aaKnown RBP7.55□□□□□ -1.2
RNPC3-209ENST00000533834 PIK3CAP42336 1068 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 BPIFB4P59827 614 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 RIPK1Q13546 671 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 ZNF268Q14587 947 aaPredicted RBP7.55□□□□□ -1.2
RNPC3-209ENST00000533834 KYNUQ16719 465 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 SLC10A6Q3KNW5 377 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 IER5Q5VY09 327 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 DENND2CQ68D51 928 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 TMEM270Q6UE05 265 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 BBS12Q6ZW61 710 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 HOOK3Q86VS8 718 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 TRIM50Q86XT4 487 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 RCOR2Q8IZ40 523 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 FITM2Q8N6M3 262 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 FAM118BQ9BPY3 351 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 C11orf70Q9BRQ4 267 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 FOXP3Q9BZS1 431 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 NIF3L1Q9GZT8 377 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 TLE6Q9H808 572 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 KCNK13Q9HB14 408 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 PNPLA8Q9NP80 782 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 PPANQ9NQ55 473 aaKnown RBP7.55□□□□□ -1.2
RNPC3-209ENST00000533834 MTMR10Q9NXD2 777 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 TMEM110-MUSTN1A8MSY1 372 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 PRKCGP05129 697 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 PECAM1P16284 738 aaPredicted RBP7.55□□□□□ -1.2
RNPC3-209ENST00000533834 CD58P19256 250 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 ELF3P78545 371 aaPredicted RBP7.55□□□□□ -1.2
RNPC3-209ENST00000533834 LDLRAD1Q5T700 205 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 MPZL3Q6UWV2 235 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 PASD1Q8IV76 773 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 L3MBTL3Q96JM7 780 aaPredicted RBP7.55□□□□□ -1.2
RNPC3-209ENST00000533834 MSTO1Q9BUK6 570 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 IP6K2Q9UHH9 426 aa7.55□□□□□ -1.2
RNPC3-209ENST00000533834 TMEM120BA0PK00 339 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 ERLIN2O94905 339 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 NFICP08651 508 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 LIG4P49917 911 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 CCNG1P51959 295 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 TFDP3Q5H9I0 405 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 RNF43Q68DV7 783 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 ADGRD1Q6QNK2 874 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 ECHDC2Q86YB7 292 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 KLHDC8BQ8IXV7 354 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 PQLC3Q8N755 202 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 CLMNQ96JQ2 1002 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 ASCC2Q9H1I8 757 aaPredicted RBP7.54□□□□□ -1.2
RNPC3-209ENST00000533834 ADAMTS10Q9H324 1103 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 GBA2Q9HCG7 927 aaPredicted RBP7.54□□□□□ -1.2
RNPC3-209ENST00000533834 ARHGEF4Q9NR80 690 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 AGTPBP1Q9UPW5 1226 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 TEX264Q9Y6I9 313 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 SCINQ9Y6U3 715 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 SCN10AQ9Y5Y9 1956 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 C2CD4BA6NLJ0 364 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 TLR3O15455 904 aaKnown RBP7.54□□□□□ -1.2
RNPC3-209ENST00000533834 ZBTB7AO95365 584 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 HOXA11P31270 313 aaPredicted RBP7.54□□□□□ -1.2
RNPC3-209ENST00000533834 STAT5BP51692 787 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 NEK3P51956 506 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 EFNA5P52803 228 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 POLGP54098 1239 aaPredicted RBP7.54□□□□□ -1.2
RNPC3-209ENST00000533834 MORF4L2Q15014 288 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 MTFR1Q15390 333 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 SH3PXD2AQ5TCZ1 1133 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 SLC9A4Q6AI14 798 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 PPP1R2P3Q6NXS1 205 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 OLFML1Q6UWY5 402 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 PHLDB2Q86SQ0 1253 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 MS4A4AQ96JQ5 239 aa7.54□□□□□ -1.2
RNPC3-209ENST00000533834 MAK16Q9BXY0 300 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms