RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 ARMCX6Q7L4S7 300 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 ITIH5Q86UX2 942 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 MDGA1Q8NFP4 955 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 TSTD1Q8NFU3 115 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 OLIG1Q8TAK6 271 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 USP33Q8TEY7 942 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 RLN3Q8WXF3 142 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 KIFAP3Q92845 792 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 CD101Q93033 1021 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 FNBP1Q96RU3 617 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 SEPT5Q99719 369 aaPredicted RBP13.36□□□□□ -0.27
SVIP-205ENST00000533774 BHMT2Q9H2M3 363 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 SLC32A1Q9H598 525 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 TMEM134Q9H6X4 195 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 ECT2Q9H8V3 914 aa13.36□□□□□ -0.27
SVIP-205ENST00000533774 ATXN2Q99700 1313 aaKnown RBP13.36□□□□□ -0.27
SVIP-205ENST00000533774 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 CYSRT1A8MQ03 144 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 UPK3BL1B0FP48 263 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 UPK3BL2E5RIL1 263 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 HMGA1P17096 107 aaKnown RBP13.35□□□□□ -0.27
SVIP-205ENST00000533774 XBP1P17861 261 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 TYMPP19971 482 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 NLRP12P59046 1061 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 MAPK7Q13164 816 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 SLC39A12Q504Y0 691 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 TMEM92Q6UXU6 159 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 USP37Q86T82 979 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 LRRTM3Q86VH5 581 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 TMEFF1Q8IYR6 380 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 OR2I1PQ8NGU4 316 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 ACDQ96AP0 544 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 CNOT6LQ96LI5 555 aaKnown RBP13.35□□□□□ -0.27
SVIP-205ENST00000533774 TCHPQ9BT92 498 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 OXCT2Q9BYC2 517 aaPredicted RBP13.35□□□□□ -0.27
SVIP-205ENST00000533774 TDP1Q9NUW8 608 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 ORC3Q9UBD5 711 aaPredicted RBP13.35□□□□□ -0.27
SVIP-205ENST00000533774 DAXXQ9UER7 740 aaPredicted RBP13.35□□□□□ -0.27
SVIP-205ENST00000533774 CYP46A1Q9Y6A2 500 aa13.35□□□□□ -0.27
SVIP-205ENST00000533774 TTC26A0AVF1 554 aa13.34□□□□□ -0.27
SVIP-205ENST00000533774 K7EQS6 105 aa13.34□□□□□ -0.27
SVIP-205ENST00000533774 TADA3O75528 432 aa13.34□□□□□ -0.27
SVIP-205ENST00000533774 MCM7P33993 719 aa13.34□□□□□ -0.27
SVIP-205ENST00000533774 SEC13P55735 322 aa13.34□□□□□ -0.27
SVIP-205ENST00000533774 LMAN2Q12907 356 aa13.34□□□□□ -0.27
SVIP-205ENST00000533774 MGAT5BQ3V5L5 792 aa13.34□□□□□ -0.27
SVIP-205ENST00000533774 C2orf27AQ580R0 203 aa13.34□□□□□ -0.27
SVIP-205ENST00000533774 DSTYKQ6XUX3 929 aa13.34□□□□□ -0.27
SVIP-205ENST00000533774 SFTPA1Q8IWL2 248 aa13.34□□□□□ -0.27
SVIP-205ENST00000533774 CCDC33Q8N5R6 958 aa13.34□□□□□ -0.27
SVIP-205ENST00000533774 ADAM32Q8TC27 787 aa13.34□□□□□ -0.27
SVIP-205ENST00000533774 HNRNPLLQ8WVV9 542 aaKnown RBP13.34□□□□□ -0.27
SVIP-205ENST00000533774 SENP8Q96LD8 212 aa13.34□□□□□ -0.27
SVIP-205ENST00000533774 SLC22A12Q96S37 553 aa13.34□□□□□ -0.27
SVIP-205ENST00000533774 HSFX1Q9UBD0 423 aa13.34□□□□□ -0.27
SVIP-205ENST00000533774 WNT6Q9Y6F9 365 aa13.34□□□□□ -0.27
SVIP-205ENST00000533774 MAST4O15021 2626 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 SLC16A4O15374 487 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 HIP1RO75146 1068 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 PPP1R37O75864 691 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 CDKL5O76039 1030 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 CD59P13987 128 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 AVPR1AP37288 418 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 OPRD1P41143 372 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 P2RY2P41231 377 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 TNFSF9P41273 254 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 GPR15P49685 360 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 FOSBP53539 338 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 LILRA4P59901 499 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 BFSP1Q12934 665 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 DMP1Q13316 513 aaPredicted RBP13.33□□□□□ -0.28
SVIP-205ENST00000533774 NOLC1Q14978 699 aaKnown RBP eCLIP13.33□□□□□ -0.28
SVIP-205ENST00000533774 PDGFRLQ15198 375 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 ZNF77Q15935 545 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 GAB4Q2WGN9 574 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 EML3Q32P44 896 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 SLC23A3Q6PIS1 610 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 C11orf74Q86VG3 221 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 CAMK1GQ96NX5 476 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 GCNAQ96QF7 691 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 NUSAP1Q9BXS6 441 aaKnown RBP13.33□□□□□ -0.28
SVIP-205ENST00000533774 ZCWPW1Q9H0M4 648 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 LINC00597Q9H2U6 94 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 ANKFY1Q9P2R3 1169 aa13.33□□□□□ -0.28
SVIP-205ENST00000533774 SFI1A8K8P3 1242 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 LACTBL1A8MY62 500 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 H0Y626 953 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 TNFRSF10BO14763 440 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 PFKFB2O60825 505 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 TRIM16O95361 564 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 SEC24BO95487 1268 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 HAPLN1P10915 354 aaPredicted RBP13.32□□□□□ -0.28
SVIP-205ENST00000533774 ITPKAP23677 461 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 TUFMP49411 452 aaKnown RBP13.32□□□□□ -0.28
SVIP-205ENST00000533774 AMPD2Q01433 879 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 MESP2Q0VG99 397 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 MTF1Q14872 753 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 VEPH1Q14D04 833 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 CRY1Q16526 586 aa13.32□□□□□ -0.28
SVIP-205ENST00000533774 SDHAF4Q5VUM1 108 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms