RNA–Protein interactions for RNA: ENST00000533685.1

SYVN1-215, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-215ENST00000533685 TWNKQ96RR1 684 aa13.16□□□□□ -0.3
SYVN1-215ENST00000533685 HNRNPABQ99729 332 aaKnown RBP13.16□□□□□ -0.3
SYVN1-215ENST00000533685 ZNF518BQ9C0D4 1074 aa13.16□□□□□ -0.3
SYVN1-215ENST00000533685 LHX5Q9H2C1 402 aa13.16□□□□□ -0.3
SYVN1-215ENST00000533685 TLR9Q9NR96 1032 aa13.16□□□□□ -0.3
SYVN1-215ENST00000533685 HMGXB4Q9UGU5 601 aa13.16□□□□□ -0.3
SYVN1-215ENST00000533685 NME7Q9Y5B8 376 aa13.16□□□□□ -0.3
SYVN1-215ENST00000533685 TIMM13Q9Y5L4 95 aaPredicted RBP13.16□□□□□ -0.3
SYVN1-215ENST00000533685 RANBP2P49792 3224 aaKnown RBP13.16□□□□□ -0.3
SYVN1-215ENST00000533685 O00370 1275 aa13.15□□□□□ -0.3
SYVN1-215ENST00000533685 FSCN2O14926 492 aa13.15□□□□□ -0.3
SYVN1-215ENST00000533685 ARHGEF15O94989 841 aa13.15□□□□□ -0.3
SYVN1-215ENST00000533685 PNMA6AP0CW24 399 aaPredicted RBP13.15□□□□□ -0.3
SYVN1-215ENST00000533685 CDH5P33151 784 aaPredicted RBP13.15□□□□□ -0.3
SYVN1-215ENST00000533685 NDUFV1P49821 464 aa13.15□□□□□ -0.3
SYVN1-215ENST00000533685 GPR17Q13304 367 aa13.15□□□□□ -0.3
SYVN1-215ENST00000533685 SMC1AQ14683 1233 aaKnown RBP13.15□□□□□ -0.3
SYVN1-215ENST00000533685 PTPN14Q15678 1187 aa13.15□□□□□ -0.3
SYVN1-215ENST00000533685 PSMD5Q16401 504 aa13.15□□□□□ -0.3
SYVN1-215ENST00000533685 CFAP221Q4G0U5 840 aa13.15□□□□□ -0.3
SYVN1-215ENST00000533685 TPGS2Q68CL5 300 aa13.15□□□□□ -0.3
SYVN1-215ENST00000533685 LCLAT1Q6UWP7 414 aa13.15□□□□□ -0.3
SYVN1-215ENST00000533685 RTL10Q7L3V2 364 aa13.15□□□□□ -0.3
SYVN1-215ENST00000533685 TAS1R1Q7RTX1 841 aa13.15□□□□□ -0.3
SYVN1-215ENST00000533685 ACOT1Q86TX2 421 aa13.15□□□□□ -0.3
SYVN1-215ENST00000533685 POF1BQ8WVV4 589 aa13.15□□□□□ -0.3
SYVN1-215ENST00000533685 ZNF606Q8WXB4 792 aa13.15□□□□□ -0.3
SYVN1-215ENST00000533685 RIN2Q8WYP3 895 aaPredicted RBP13.15□□□□□ -0.3
SYVN1-215ENST00000533685 HEXIM2Q96MH2 286 aaKnown RBP13.15□□□□□ -0.3
SYVN1-215ENST00000533685 BAG1Q99933 345 aaPredicted RBP13.15□□□□□ -0.3
SYVN1-215ENST00000533685 NKX2-4Q9H2Z4 354 aa13.15□□□□□ -0.3
SYVN1-215ENST00000533685 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.15□□□□□ -0.3
SYVN1-215ENST00000533685 ATP8B3O60423 1300 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 TNRC18O15417 2968 aaPredicted RBP13.14□□□□□ -0.31
SYVN1-215ENST00000533685 VWA8A3KMH1 1905 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 PDGFRBP09619 1106 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 SETSIPP0DME0 302 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 RAB33AQ14088 237 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 ASTE1Q2TB18 679 aaPredicted RBP13.14□□□□□ -0.31
SYVN1-215ENST00000533685 PKDCCQ504Y2 493 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 ZNF394Q53GI3 561 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 HS1BP3Q53T59 392 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 VSTM1Q6UX27 236 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 NOP9Q86U38 636 aaKnown RBP13.14□□□□□ -0.31
SYVN1-215ENST00000533685 TMEM139Q8IV31 216 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 MRPL43Q8N983 215 aaKnown RBP13.14□□□□□ -0.31
SYVN1-215ENST00000533685 ANKRD52Q8NB46 1076 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 SPPL2BQ8TCT7 592 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 TCF25Q9BQ70 676 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 CLSTN3Q9BQT9 956 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 EMILIN2Q9BXX0 1053 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 DPEP3Q9H4B8 488 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 HAUS4Q9H6D7 363 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 PNPLA8Q9NP80 782 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 CRTAC1Q9NQ79 661 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 ARHGAP20Q9P2F6 1191 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 CEP83Q9Y592 693 aa13.14□□□□□ -0.31
SYVN1-215ENST00000533685 NLRC5Q86WI3 1866 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 THAP12O43422 761 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 ABLIM3O94929 683 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 PTMAP06454 111 aaKnown RBP13.13□□□□□ -0.31
SYVN1-215ENST00000533685 GZMAP12544 262 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 CD19P15391 556 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 MAGEA11P43364 429 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 BCAT1P54687 386 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 SLC8A3P57103 927 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 FMO1Q01740 532 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 ARID5AQ03989 594 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 GPM6BQ13491 265 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 SLC18A3Q16572 532 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 TDRD12Q587J7 1177 aaKnown RBP13.13□□□□□ -0.31
SYVN1-215ENST00000533685 ZNF571Q7Z3V5 609 aaPredicted RBP13.13□□□□□ -0.31
SYVN1-215ENST00000533685 TMC7Q7Z402 723 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 FUKQ8N0W3 1084 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 SLC30A5Q8TAD4 765 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 ZNF461Q8TAF7 563 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 OLIG1Q8TAK6 271 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 STK32AQ8WU08 396 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 TFAP2BQ92481 460 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 CYFIP2Q96F07 1278 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 SMARCD1Q96GM5 515 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 PCED1BQ96HM7 432 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 CCDC42Q96M95 316 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 AGPAT1Q99943 283 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 ZSWIM1Q9BR11 485 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 UBXN6Q9BZV1 441 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 NHEJ1Q9H9Q4 299 aaPredicted RBP13.13□□□□□ -0.31
SYVN1-215ENST00000533685 CSNK1G1Q9HCP0 422 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 CYLDQ9NQC7 956 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 HESX1Q9UBX0 185 aa13.13□□□□□ -0.31
SYVN1-215ENST00000533685 AFF4Q9UHB7 1163 aaKnown RBP13.13□□□□□ -0.31
SYVN1-215ENST00000533685 COLQQ9Y215 455 aaPredicted RBP13.13□□□□□ -0.31
SYVN1-215ENST00000533685 GBF1Q92538 1859 aa13.12□□□□□ -0.31
SYVN1-215ENST00000533685 MYBPHLA2RUH7 354 aa13.12□□□□□ -0.31
SYVN1-215ENST00000533685 C2orf71A6NGG8 1288 aa13.12□□□□□ -0.31
SYVN1-215ENST00000533685 ARHGAP6O43182 974 aa13.12□□□□□ -0.31
SYVN1-215ENST00000533685 LCA5LO95447 670 aa13.12□□□□□ -0.31
SYVN1-215ENST00000533685 CYP1A1P04798 512 aaPredicted RBP13.12□□□□□ -0.31
SYVN1-215ENST00000533685 ADH1AP07327 375 aa13.12□□□□□ -0.31
SYVN1-215ENST00000533685 CHRNB2P17787 502 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms