RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 DIS3L2Q8IYB7 885 aaKnown RBP8.46□□□□□ -1.06
NXF1-215ENST00000533440 CHCHD4Q8N4Q1 142 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 CPA6Q8N4T0 437 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 MAB21L3Q8N8X9 362 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 CCDC26Q8TAB7 109 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 USP33Q8TEY7 942 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 C2orf15Q8WU43 125 aaKnown RBP8.46□□□□□ -1.06
NXF1-215ENST00000533440 OSCP1Q8WVF1 389 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 SENP8Q96LD8 212 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 SEPT5Q99719 369 aaPredicted RBP8.46□□□□□ -1.06
NXF1-215ENST00000533440 NUSAP1Q9BXS6 441 aaKnown RBP8.46□□□□□ -1.06
NXF1-215ENST00000533440 ZCWPW1Q9H0M4 648 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 C17orf75Q9HAS0 396 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 KMT5AQ9NQR1 393 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 PDRG1Q9NUG6 133 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 TMEM74BQ9NUR3 256 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 PTPRDP23468 1912 aa8.46□□□□□ -1.06
NXF1-215ENST00000533440 PI4KAP42356 2102 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 TSC2P49815 1807 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 TNRC6BQ9UPQ9 1833 aaKnown RBP8.45□□□□□ -1.06
NXF1-215ENST00000533440 GON4LQ3T8J9 2241 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 K7EQS6 105 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 CLDN3O15551 220 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 HIP1RO75146 1068 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 ADRB2P07550 413 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 CLTAP09496 248 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 OR52Z1P0C646 297 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 HAPLN1P10915 354 aaPredicted RBP8.45□□□□□ -1.06
NXF1-215ENST00000533440 ODC1P11926 461 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 NMT1P30419 496 aaKnown RBP8.45□□□□□ -1.06
NXF1-215ENST00000533440 RDXP35241 583 aaKnown RBP8.45□□□□□ -1.06
NXF1-215ENST00000533440 CCT6AP40227 531 aaKnown RBP8.45□□□□□ -1.06
NXF1-215ENST00000533440 P2RY2P41231 377 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 GUCY2FP51841 1108 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 FAM193AP78312 1265 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 SCAPQ12770 1279 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 SMARCB1Q12824 385 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 PSMD2Q13200 908 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 ORC2Q13416 577 aaPredicted RBP8.45□□□□□ -1.06
NXF1-215ENST00000533440 MTF1Q14872 753 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 ZNF77Q15935 545 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 TAF12Q16514 161 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 CRY1Q16526 586 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 ZNF423Q2M1K9 1284 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 COL28A1Q2UY09 1125 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 EML3Q32P44 896 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 SPDYCQ5MJ68 293 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 SPATA1Q5VX52 437 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 TXNDC8Q6A555 127 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 ANO7Q6IWH7 933 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 C19orf48Q6RUI8 117 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 ZPBP2Q6X784 338 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 SYT12Q8IV01 421 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 MDGA1Q8NFP4 955 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 SPPL2BQ8TCT7 592 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 GIPC2Q8TF65 315 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 BBC3Q96PG8 261 aaPredicted RBP8.45□□□□□ -1.06
NXF1-215ENST00000533440 FNBP1Q96RU3 617 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 TSPAN18Q96SJ8 248 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 HAPLN2Q9GZV7 340 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 ANKFY1Q9P2R3 1169 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 MMP17Q9ULZ9 603 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 KIAA1024Q9UPX6 916 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 OBSL1O75147 1896 aa8.45□□□□□ -1.06
NXF1-215ENST00000533440 ZNF638Q14966 1978 aaKnown RBP8.44□□□□□ -1.06
NXF1-215ENST00000533440 ANTXRLA6NF34 631 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 LACTBL1A8MY62 500 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 PIRO00625 290 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 SLC16A4O15374 487 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 XPOTO43592 962 aaKnown RBP8.44□□□□□ -1.06
NXF1-215ENST00000533440 TADA3O75528 432 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 HNRNPLP14866 589 aaKnown RBP eCLIP8.44□□□□□ -1.06
NXF1-215ENST00000533440 HOXD12P35452 270 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 TNFSF9P41273 254 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 DPP6P42658 865 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 PTGER3P43115 390 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 MAPK8P45983 427 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 FAM160A1Q05DH4 1040 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 USP4Q13107 963 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 HNRNPDQ14103 355 aaKnown RBP8.44□□□□□ -1.06
NXF1-215ENST00000533440 C9orf57Q5W0N0 161 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 RINT1Q6NUQ1 792 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 TMEM92Q6UXU6 159 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 C1orf186Q6ZWK4 172 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 LPCAT2Q7L5N7 544 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 LRRTM3Q86VH5 581 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 TMEM161BQ8NDZ6 487 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 SPIRE2Q8WWL2 714 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 MRPS31Q92665 395 aaKnown RBP8.44□□□□□ -1.06
NXF1-215ENST00000533440 ATP2A3Q93084 1043 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 DRC1Q96MC2 740 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 RUSC1Q9BVN2 902 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 DDX19AQ9NUU7 478 aaKnown RBP8.44□□□□□ -1.06
NXF1-215ENST00000533440 DUS2Q9NX74 493 aaKnown RBP8.44□□□□□ -1.06
NXF1-215ENST00000533440 MBD1Q9UIS9 605 aaPredicted RBP8.44□□□□□ -1.06
NXF1-215ENST00000533440 PILRBQ9UKJ0 227 aa8.44□□□□□ -1.06
NXF1-215ENST00000533440 ACACAQ13085 2346 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 PLXND1Q9Y4D7 1925 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.43□□□□□ -1.06
NXF1-215ENST00000533440 ANO9A1A5B4 782 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms