RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 SPPL2BQ8TCT7 592 aa14.07□□□□□ -0.16
COPB1-209ENST00000533096 TPSD1Q9BZJ3 242 aa14.07□□□□□ -0.16
COPB1-209ENST00000533096 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.07□□□□□ -0.16
COPB1-209ENST00000533096 TMLHEQ9NVH6 421 aa14.07□□□□□ -0.16
COPB1-209ENST00000533096 CPSF3Q9UKF6 684 aaKnown RBP14.07□□□□□ -0.16
COPB1-209ENST00000533096 ZMIZ1Q9ULJ6 1067 aa14.07□□□□□ -0.16
COPB1-209ENST00000533096 WNT6Q9Y6F9 365 aa14.07□□□□□ -0.16
COPB1-209ENST00000533096 F5P12259 2224 aa14.07□□□□□ -0.16
COPB1-209ENST00000533096 ANO9A1A5B4 782 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 TISP43B9A030 160 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 KHNYNO15037 678 aaKnown RBP14.06□□□□□ -0.16
COPB1-209ENST00000533096 TRAK2O60296 914 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 CYP11A1P05108 521 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 TAF6P49848 677 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 SEC13P55735 322 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 ZNF252P-AS1Q0IIN9 211 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 PDGFRLQ15198 375 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 ZC2HC1CQ53FD0 456 aaPredicted RBP14.06□□□□□ -0.16
COPB1-209ENST00000533096 USP39Q53GS9 565 aaKnown RBP14.06□□□□□ -0.16
COPB1-209ENST00000533096 C2orf27AQ580R0 203 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 UNQ6494/PRO21346Q6UXR6 183 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 CPA6Q8N4T0 437 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 CCDC33Q8N5R6 958 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 CD101Q93033 1021 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 EXOC4Q96A65 974 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 TSPAN18Q96SJ8 248 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 REEP2Q9BRK0 252 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 LINC00597Q9H2U6 94 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 ECT2Q9H8V3 914 aa14.06□□□□□ -0.16
COPB1-209ENST00000533096 KMT2BQ9UMN6 2715 aaPredicted RBP14.06□□□□□ -0.16
COPB1-209ENST00000533096 BCLAF3A2AJT9 711 aaKnown RBP14.05□□□□□ -0.16
COPB1-209ENST00000533096 KPNA7A9QM74 516 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 PATE3B3GLJ2 98 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 FAM189A1O60320 539 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 ADRB2P07550 413 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 CSH1P0DML2 217 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 CSH2P0DML3 217 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 PAX3P23760 479 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 ACAT1P24752 427 aaKnown RBP14.05□□□□□ -0.16
COPB1-209ENST00000533096 CYP2F1P24903 491 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 IFNAR2P48551 515 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 DHPSP49366 369 aaPredicted RBP14.05□□□□□ -0.16
COPB1-209ENST00000533096 TSPY1Q01534 308 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 MTF1Q14872 753 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 FBXO43Q4G163 708 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 SLC39A4Q6P5W5 647 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 SYT13Q7L8C5 426 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 SCN4BQ8IWT1 228 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 TSTD1Q8NFU3 115 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 RASSF8Q8NHQ8 419 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 C2orf15Q8WU43 125 aaKnown RBP14.05□□□□□ -0.16
COPB1-209ENST00000533096 PIGKQ92643 395 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 EZH1Q92800 747 aaPredicted RBP14.05□□□□□ -0.16
COPB1-209ENST00000533096 ZSCAN31Q96LW9 406 aaPredicted RBP14.05□□□□□ -0.16
COPB1-209ENST00000533096 IKZF4Q9H2S9 585 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 KCND2Q9NZV8 630 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 TICRRQ7Z2Z1 1910 aa14.05□□□□□ -0.16
COPB1-209ENST00000533096 ANTXRLA6NF34 631 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 MAP3K13O43283 966 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 CKMP06732 381 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 HOXB3P14651 431 aaPredicted RBP14.04□□□□□ -0.16
COPB1-209ENST00000533096 DDX6P26196 483 aaKnown RBP eCLIP14.04□□□□□ -0.163e-6■■■□□ 19.2
COPB1-209ENST00000533096 UBA7P41226 1012 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 IRX4P78413 519 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 TFAMQ00059 246 aaKnown RBP14.04□□□□□ -0.16
COPB1-209ENST00000533096 NR1H3Q13133 447 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 MCM6Q14566 821 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 HYIQ5T013 277 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 ANO7Q6IWH7 933 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 ARL14EPQ8N8R7 260 aaPredicted RBP14.04□□□□□ -0.16
COPB1-209ENST00000533096 LRRC15Q8TF66 581 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 NOC3LQ8WTT2 800 aaKnown RBP14.04□□□□□ -0.16
COPB1-209ENST00000533096 SLC22A12Q96S37 553 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 ASB7Q9H672 318 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 PARVGQ9HBI0 331 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 TMEM9BQ9NQ34 198 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 ZMYM5Q9UJ78 669 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 GTF3C4Q9UKN8 822 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 AGO2Q9UKV8 859 aaKnown RBP14.04□□□□□ -0.16
COPB1-209ENST00000533096 DERAQ9Y315 318 aa14.04□□□□□ -0.16
COPB1-209ENST00000533096 TRAV19A0A0A6YYK7 116 aa14.03□□□□□ -0.16
COPB1-209ENST00000533096 USP17L7P0C7H9 530 aa14.03□□□□□ -0.16
COPB1-209ENST00000533096 HDCP19113 662 aa14.03□□□□□ -0.16
COPB1-209ENST00000533096 RPL10AP62906 217 aaKnown RBP14.03□□□□□ -0.16
COPB1-209ENST00000533096 SMARCB1Q12824 385 aa14.03□□□□□ -0.16
COPB1-209ENST00000533096 KARSQ15046 597 aaKnown RBP14.03□□□□□ -0.16
COPB1-209ENST00000533096 SV2CQ496J9 727 aa14.03□□□□□ -0.16
COPB1-209ENST00000533096 KIAA1211LQ6NV74 962 aa14.03□□□□□ -0.16
COPB1-209ENST00000533096 EFCAB13Q8IY85 973 aa14.03□□□□□ -0.16
COPB1-209ENST00000533096 DEFB124Q8NES8 71 aa14.03□□□□□ -0.16
COPB1-209ENST00000533096 SH3RF2Q8TEC5 729 aa14.03□□□□□ -0.16
COPB1-209ENST00000533096 OSCP1Q8WVF1 389 aa14.03□□□□□ -0.16
COPB1-209ENST00000533096 CALML4Q96GE6 196 aa14.03□□□□□ -0.16
COPB1-209ENST00000533096 KIF9Q9HAQ2 790 aa14.03□□□□□ -0.16
COPB1-209ENST00000533096 DDX43Q9NXZ2 648 aaKnown RBP14.03□□□□□ -0.16
COPB1-209ENST00000533096 ODF2LQ9ULJ1 636 aa14.03□□□□□ -0.16
COPB1-209ENST00000533096 AGAP1Q9UPQ3 857 aa14.03□□□□□ -0.16
COPB1-209ENST00000533096 LNP1A1A4G5 178 aa14.02□□□□□ -0.17
COPB1-209ENST00000533096 HUS1O60921 280 aa14.02□□□□□ -0.17
COPB1-209ENST00000533096 TBCAO75347 108 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms