RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 ITGAXP20702 1163 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 ADD2P35612 726 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 BFSP2Q13515 415 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 WASHC2DQ5SRD0 308 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 SNRNP48Q6IEG0 339 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 INTS5Q6P9B9 1019 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 CCDC81Q6ZN84 652 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 BRSK2Q8IWQ3 736 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 SYTL5Q8TDW5 730 aaPredicted RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 KAT2BQ92831 832 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 P2RX5Q93086 422 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 HPS3Q969F9 1004 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 TEX13BQ9BXU2 312 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 EDEM3Q9BZQ6 932 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 TIMMDC1Q9NPL8 285 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 KIF17Q9P2E2 1029 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 ZSCAN5BA6NJL1 495 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 TNFAIP8O95379 198 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 PHC1P78364 1004 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 EIF2B5Q13144 721 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 OR9Q1Q8NGQ5 310 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 AK8Q96MA6 479 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 LSG1Q9H089 658 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 TDRD3Q9H7E2 651 aaKnown RBP7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 ZSWIM6Q9HCJ5 1215 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 HOXC10Q9NYD6 342 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 COQ6Q9Y2Z9 468 aa7.26□□□□□ -1.25
TGFBR3-210ENST00000533089 ZBED1O96006 694 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 ASNSP08243 561 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 SP100P23497 879 aaPredicted RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 YWHABP31946 246 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 KIAA1755Q5JYT7 1200 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 DHX40Q8IX18 779 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 GRAMD1CQ8IYS0 662 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 SMARCAD1Q9H4L7 1026 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 HMG20AQ9NP66 347 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 CYP39A1Q9NYL5 469 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 DBR1Q9UK59 544 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 SIGLEC1Q9BZZ2 1709 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 PNMA6FA0A0J9YX94 578 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 ABLIM1O14639 778 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 TPPPO94811 219 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 CDC25AP30304 524 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 RUNX1T1Q06455 604 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 MTMR1Q13613 665 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 MXD4Q14582 209 aaPredicted RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 MTF1Q14872 753 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 CNGA2Q16280 664 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 PLEKHM3Q6ZWE6 761 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 APOBEC3FQ8IUX4 373 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 ZNF555Q8NEP9 628 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 SPATA4Q8NEY3 305 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 SH3RF3Q8TEJ3 882 aaPredicted RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 RNF26Q9BY78 433 aaPredicted RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 FOXP1Q9H334 677 aaPredicted RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 ALG13Q9NP73 1137 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 NGRNQ9NPE2 291 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 ABCB11O95342 1321 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 NOS1APO75052 506 aaPredicted RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 PSMA2P25787 234 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 EIF4A3P38919 411 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 RHAGQ02094 409 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 ATP13A5Q4VNC0 1218 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 C1orf50Q9BV19 199 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 WDR35Q9P2L0 1181 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 hCG_1984214I3L0E3 225 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 VWA5AO00534 786 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 HUS1O60921 280 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 KRT37O76014 449 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 PDE9AO76083 593 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 IL10P22301 178 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 PTDSS1P48651 473 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 ZBED6P86452 979 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 CARTPTQ16568 116 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 BBS9Q3SYG4 887 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 YTHDF3Q7Z739 585 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 STX19Q8N4C7 294 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 PBXIP1Q96AQ6 731 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 RMDN3Q96TC7 470 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 SARS2Q9NP81 518 aaKnown RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 EMILIN3Q9NT22 766 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 KCNH4Q9UQ05 1017 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 PCDHGC5Q9Y5F6 944 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 PCDHA5Q9Y5H7 936 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 SMIM31A0A1B0GVY4 71 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 FOXN3O00409 490 aaPredicted RBP7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 PALMO75781 387 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 NPTXRO95502 500 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 FGFR4P22455 802 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 HADHAP40939 763 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 PHKA2P46019 1235 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 ZNF568Q3ZCX4 644 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 ZNF667Q5HYK9 610 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 C10orf76Q5T2E6 689 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 RASSF6Q6ZTQ3 369 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 TMEM179Q6ZVK1 233 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 RHPN2Q8IUC4 686 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 SYTL1Q8IYJ3 562 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 BORCS5Q969J3 196 aa7.25□□□□□ -1.25
TGFBR3-210ENST00000533089 FSD1LQ9BXM9 530 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms