RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 FAXDC2Q96IV6 333 aa26.5■■□□□ 1.83
USP48-214ENST00000532737 LPIN3Q9BQK8 851 aa26.5■■□□□ 1.83
USP48-214ENST00000532737 PRKD2Q9BZL6 878 aa26.5■■□□□ 1.83
USP48-214ENST00000532737 HSD3B7Q9H2F3 369 aa26.5■■□□□ 1.83
USP48-214ENST00000532737 DPEP3Q9H4B8 488 aa26.5■■□□□ 1.83
USP48-214ENST00000532737 EPHX3Q9H6B9 360 aa26.5■■□□□ 1.83
USP48-214ENST00000532737 CRTAC1Q9NQ79 661 aa26.5■■□□□ 1.83
USP48-214ENST00000532737 SLC27A5Q9Y2P5 690 aa26.5■■□□□ 1.83
USP48-214ENST00000532737 HNRNPA1P09651 372 aaKnown RBP eCLIP26.49■■□□□ 1.83
USP48-214ENST00000532737 PRKCSHP14314 528 aaPredicted RBP26.49■■□□□ 1.83
USP48-214ENST00000532737 SMARCB1Q12824 385 aa26.49■■□□□ 1.83
USP48-214ENST00000532737 VWA3BQ502W6 1294 aa26.49■■□□□ 1.83
USP48-214ENST00000532737 CES5AQ6NT32 575 aa26.49■■□□□ 1.83
USP48-214ENST00000532737 RTL10Q7L3V2 364 aa26.49■■□□□ 1.83
USP48-214ENST00000532737 DHX40Q8IX18 779 aaKnown RBP26.49■■□□□ 1.83
USP48-214ENST00000532737 SUSD6Q92537 303 aa26.49■■□□□ 1.83
USP48-214ENST00000532737 ARID3AQ99856 593 aa26.49■■□□□ 1.83
USP48-214ENST00000532737 INTS2Q9H0H0 1204 aaKnown RBP26.49■■□□□ 1.83
USP48-214ENST00000532737 NDST4Q9H3R1 872 aa26.49■■□□□ 1.83
USP48-214ENST00000532737 TAB2Q9NYJ8 693 aa26.49■■□□□ 1.83
USP48-214ENST00000532737 HMGXB4Q9UGU5 601 aa26.49■■□□□ 1.83
USP48-214ENST00000532737 INSL5Q9Y5Q6 135 aa26.49■■□□□ 1.83
USP48-214ENST00000532737 MTCL1Q9Y4B5 1905 aaKnown RBP26.48■■□□□ 1.83
USP48-214ENST00000532737 CCL16O15467 120 aa26.48■■□□□ 1.83
USP48-214ENST00000532737 ZNF18P17022 549 aa26.48■■□□□ 1.83
USP48-214ENST00000532737 PTPN1P18031 435 aaKnown RBP26.48■■□□□ 1.83
USP48-214ENST00000532737 CD58P19256 250 aa26.48■■□□□ 1.83
USP48-214ENST00000532737 HOXA9P31269 272 aa26.48■■□□□ 1.83
USP48-214ENST00000532737 NDST1P52848 882 aa26.48■■□□□ 1.83
USP48-214ENST00000532737 NFE2Q16621 373 aaPredicted RBP26.48■■□□□ 1.83
USP48-214ENST00000532737 PUS10Q3MIT2 529 aaKnown RBP26.48■■□□□ 1.83
USP48-214ENST00000532737 KHSRPQ92945 711 aaKnown RBP eCLIP26.48■■□□□ 1.835e-7■□□□□ 11.2
USP48-214ENST00000532737 NT5C1BQ96P26 610 aa26.48■■□□□ 1.83
USP48-214ENST00000532737 CRACR2AQ9BSW2 395 aa26.48■■□□□ 1.83
USP48-214ENST00000532737 IL9P15248 144 aa26.47■■□□□ 1.83
USP48-214ENST00000532737 INCA1Q0VD86 236 aa26.47■■□□□ 1.83
USP48-214ENST00000532737 ORC1Q13415 861 aa26.47■■□□□ 1.83
USP48-214ENST00000532737 CUL2Q13617 745 aa26.47■■□□□ 1.83
USP48-214ENST00000532737 IQCB1Q15051 598 aa26.47■■□□□ 1.83
USP48-214ENST00000532737 KRT31Q15323 416 aa26.47■■□□□ 1.83
USP48-214ENST00000532737 ATAT1Q5SQI0 421 aa26.47■■□□□ 1.83
USP48-214ENST00000532737 C2orf15Q8WU43 125 aaKnown RBP26.47■■□□□ 1.83
USP48-214ENST00000532737 SMG7Q92540 1137 aaKnown RBP26.47■■□□□ 1.83
USP48-214ENST00000532737 TWNKQ96RR1 684 aa26.47■■□□□ 1.83
USP48-214ENST00000532737 CD320Q9NPF0 282 aa26.47■■□□□ 1.83
USP48-214ENST00000532737 ABI2Q9NYB9 513 aaPredicted RBP26.47■■□□□ 1.83
USP48-214ENST00000532737 YIPF1Q9Y548 306 aa26.47■■□□□ 1.83
USP48-214ENST00000532737 PCDHB5Q9Y5E4 795 aa26.47■■□□□ 1.83
USP48-214ENST00000532737 SMTNL1A8MU46 457 aa26.46■■□□□ 1.83
USP48-214ENST00000532737 SOAT2O75908 522 aa26.46■■□□□ 1.83
USP48-214ENST00000532737 MDH1BQ5I0G3 518 aa26.46■■□□□ 1.83
USP48-214ENST00000532737 UNC93AQ86WB7 457 aa26.46■■□□□ 1.83
USP48-214ENST00000532737 ARHGEF19Q8IW93 802 aa26.46■■□□□ 1.83
USP48-214ENST00000532737 MYCBPAPQ8TBZ2 947 aa26.46■■□□□ 1.83
USP48-214ENST00000532737 SPPL2BQ8TCT7 592 aa26.46■■□□□ 1.83
USP48-214ENST00000532737 WHAMMQ8TF30 809 aa26.46■■□□□ 1.83
USP48-214ENST00000532737 RHOBTB2Q9BYZ6 727 aa26.46■■□□□ 1.83
USP48-214ENST00000532737 GCNT4Q9P109 453 aa26.46■■□□□ 1.83
USP48-214ENST00000532737 HSFX1Q9UBD0 423 aa26.46■■□□□ 1.83
USP48-214ENST00000532737 GTPBP10A4D1E9 387 aaKnown RBP26.45■■□□□ 1.82
USP48-214ENST00000532737 CILPO75339 1184 aa26.45■■□□□ 1.82
USP48-214ENST00000532737 LRG1P02750 347 aa26.45■■□□□ 1.82
USP48-214ENST00000532737 HAPLN1P10915 354 aaPredicted RBP26.45■■□□□ 1.82
USP48-214ENST00000532737 SLC9A1P19634 815 aa26.45■■□□□ 1.82
USP48-214ENST00000532737 TWF1Q12792 350 aa26.45■■□□□ 1.82
USP48-214ENST00000532737 CBX2Q14781 532 aaPredicted RBP26.45■■□□□ 1.82
USP48-214ENST00000532737 SMAD2Q15796 467 aaKnown RBP26.45■■□□□ 1.82
USP48-214ENST00000532737 CYP26C1Q6V0L0 522 aa26.45■■□□□ 1.82
USP48-214ENST00000532737 GBP6Q6ZN66 633 aa26.45■■□□□ 1.82
USP48-214ENST00000532737 ACOT1Q86TX2 421 aa26.45■■□□□ 1.82
USP48-214ENST00000532737 CRYBG2Q8N1P7 616 aa26.45■■□□□ 1.82
USP48-214ENST00000532737 B3GALNT2Q8NCR0 500 aa26.45■■□□□ 1.82
USP48-214ENST00000532737 KAT5Q92993 513 aa26.45■■□□□ 1.82
USP48-214ENST00000532737 MYLPFQ96A32 169 aa26.45■■□□□ 1.82
USP48-214ENST00000532737 RIPOR3Q96MK2 946 aa26.45■■□□□ 1.82
USP48-214ENST00000532737 VPS16Q9H269 839 aa26.45■■□□□ 1.82
USP48-214ENST00000532737 PIDD1Q9HB75 910 aa26.45■■□□□ 1.82
USP48-214ENST00000532737 CBX8Q9HC52 389 aa26.45■■□□□ 1.82
USP48-214ENST00000532737 CISHQ9NSE2 258 aa26.45■■□□□ 1.82
USP48-214ENST00000532737 LIMA1Q9UHB6 759 aaKnown RBP26.45■■□□□ 1.82
USP48-214ENST00000532737 POU2F2P09086 479 aa26.44■■□□□ 1.82
USP48-214ENST00000532737 MTHFRP42898 656 aa26.44■■□□□ 1.82
USP48-214ENST00000532737 MAPRE1Q15691 268 aaKnown RBP26.44■■□□□ 1.82
USP48-214ENST00000532737 MGAT5BQ3V5L5 792 aa26.44■■□□□ 1.82
USP48-214ENST00000532737 PHLDB3Q6NSJ2 640 aa26.44■■□□□ 1.82
USP48-214ENST00000532737 SPATA2LQ8IUW3 424 aaPredicted RBP26.44■■□□□ 1.82
USP48-214ENST00000532737 PCED1BQ96HM7 432 aa26.44■■□□□ 1.82
USP48-214ENST00000532737 SEPT5Q99719 369 aaPredicted RBP26.44■■□□□ 1.82
USP48-214ENST00000532737 ELOVL4Q9GZR5 314 aa26.44■■□□□ 1.82
USP48-214ENST00000532737 ABCB6Q9NP58 842 aa26.44■■□□□ 1.82
USP48-214ENST00000532737 CEP72Q9P209 647 aa26.44■■□□□ 1.82
USP48-214ENST00000532737 FAM50BQ9Y247 325 aa26.44■■□□□ 1.82
USP48-214ENST00000532737 PES1O00541 588 aaKnown RBP26.43■■□□□ 1.82
USP48-214ENST00000532737 XYLBO75191 536 aa26.43■■□□□ 1.82
USP48-214ENST00000532737 ATP1A3P13637 1013 aa26.43■■□□□ 1.82
USP48-214ENST00000532737 CDK11BP21127 795 aaKnown RBP26.43■■□□□ 1.82
USP48-214ENST00000532737 TBXAS1P24557 533 aaPredicted RBP26.43■■□□□ 1.82
USP48-214ENST00000532737 CYP2F1P24903 491 aa26.43■■□□□ 1.82
USP48-214ENST00000532737 TUFMP49411 452 aaKnown RBP26.43■■□□□ 1.82
USP48-214ENST00000532737 EXOC3L4Q17RC7 722 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms