RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 UBN1Q9NPG3 1134 aa16.02■□□□□ 0.15
PCDHA3-202ENST00000532566 ABCC6O95255 1503 aa16.02■□□□□ 0.15
PCDHA3-202ENST00000532566 DFFAO00273 331 aa16.02■□□□□ 0.15
PCDHA3-202ENST00000532566 EEF2KO00418 725 aaKnown RBP16.02■□□□□ 0.15
PCDHA3-202ENST00000532566 GEMIN4P57678 1058 aaKnown RBP16.02■□□□□ 0.15
PCDHA3-202ENST00000532566 UPF3AQ9H1J1 476 aaKnown RBP16.02■□□□□ 0.15
PCDHA3-202ENST00000532566 ECM1Q16610 540 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 LVRNQ6Q4G3 990 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 SLC9A9Q8IVB4 645 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 ERP27Q96DN0 273 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 VCPIP1Q96JH7 1222 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 KIF9Q9HAQ2 790 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 PPME1Q9Y570 386 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 DISP2A7MBM2 1401 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 FAM153BP0C7A2 387 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 OTUD4Q01804 1114 aaKnown RBP16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 PTPN11Q06124 597 aaPredicted RBP16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 SLC12A1Q13621 1099 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 FAM153CQ494X1 144 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 LRRC34Q8IZ02 419 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 KRT35Q92764 455 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 SEMA4AQ9H3S1 761 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 FAM153AQ9UHL3 310 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 ANKRD63C9JTQ0 380 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 ADCY3O60266 1144 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 PYGMP11217 842 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 CASP2P42575 452 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 AARSP49588 968 aaKnown RBP eCLIP16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 GLRA4Q5JXX5 417 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 SPOCD1Q6ZMY3 1216 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 EPS8L1Q8TE68 723 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 CYP3A43Q9HB55 503 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 AVENQ9NQS1 362 aaPredicted RBP16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 GDF3Q9NR23 364 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 REXO2Q9Y3B8 237 aaKnown RBP16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 PCDHA3Q9Y5H8 950 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 UBIAD1Q9Y5Z9 338 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 PPP1R11O60927 126 aaPredicted RBP16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 MYCP01106 439 aaPredicted RBP16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 BMT2Q1RMZ1 405 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 HSP90AA5PQ58FG0 334 aa16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 SPATA2LQ8IUW3 424 aaPredicted RBP16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 GLIS2Q9BZE0 524 aaPredicted RBP16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.01■□□□□ 0.15
PCDHA3-202ENST00000532566 TOPAZ1Q8N9V7 1692 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 TRAPPC3O43617 180 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 CPB1P15086 417 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 GTF2BQ00403 316 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 STX3Q13277 289 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 TBC1D12O60347 775 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 ALDH5A1P51649 535 aaPredicted RBP16■□□□□ 0.15
PCDHA3-202ENST00000532566 NPY5RQ15761 445 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 TMC3Q7Z5M5 1100 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 ACOT1Q86TX2 421 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 KAT5Q92993 513 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 CNPY3Q9BT09 278 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 SPON2Q9BUD6 331 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 PCMTD2Q9NV79 361 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 CXCL8P10145 99 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 ITGB5P18084 799 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 MORF4L2Q15014 288 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 FASTKD1Q53R41 847 aaKnown RBP16■□□□□ 0.15
PCDHA3-202ENST00000532566 BRSK2Q8IWQ3 736 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 SLC7A14Q8TBB6 771 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 ZNF384Q8TF68 577 aa16■□□□□ 0.15
PCDHA3-202ENST00000532566 XAB2Q9HCS7 855 aaKnown RBP16■□□□□ 0.15
PCDHA3-202ENST00000532566 A0A087WZ62 844 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 GRIK1P39086 918 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 DLG4P78352 724 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 CNTN2Q02246 1040 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 DNAJC3Q13217 504 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 KIF19Q2TAC6 998 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 ARSHQ5FYA8 562 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 LRRC6Q86X45 466 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 PDCD6IPQ8WUM4 868 aaKnown RBP15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 FDXACB1Q9BRP7 624 aaPredicted RBP15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 USP20Q9Y2K6 914 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 SPEF2Q9C093 1822 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 SMIM24O75264 130 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 AMPD2Q01433 879 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 TSTA3Q13630 321 aaPredicted RBP15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 AGGF1Q8N302 714 aaeCLIP15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 EMC1Q8N766 993 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 BNIP3LO60238 219 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 VTNP04004 478 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 FAM200BP0CF97 657 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 HSPA8P11142 646 aaKnown RBP15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 PTPRAP18433 802 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 ATICP31939 592 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 UGP2Q16851 508 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 LY6KQ17RY6 165 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 KIZQ2M2Z5 673 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 EIF1ADQ8N9N8 165 aaKnown RBP15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 ACTL9Q8TC94 416 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 KCNV2Q8TDN2 545 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 ELMO3Q96BJ8 720 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 TMEM176AQ96HP8 235 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 SUN2Q9UH99 717 aa15.99■□□□□ 0.15
PCDHA3-202ENST00000532566 RARAP10276 462 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms