RNA–Protein interactions for RNA: ENST00000532245.5

CTNND1-230, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-230ENST00000532245 KIAA1257Q9ULG3 409 aa8.35□□□□□ -1.07
CTNND1-230ENST00000532245 BARX2Q9UMQ3 279 aaPredicted RBP8.35□□□□□ -1.07
CTNND1-230ENST00000532245 C10orf71Q711Q0 1435 aa8.35□□□□□ -1.07
CTNND1-230ENST00000532245 FXR1P51114 621 aaKnown RBP eCLIP8.34□□□□□ -1.07
CTNND1-230ENST00000532245 KCNA1Q09470 495 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 GTF2H3Q13889 308 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 RABGAP1LQ5R372 815 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 ANKRD20A3Q5VUR7 823 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 KLC3Q6P597 504 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 C1orf186Q6ZWK4 172 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 ANO5Q75V66 913 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 BRSK2Q8IWQ3 736 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 GMLQ99445 158 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 FAM118BQ9BPY3 351 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 CYP3A43Q9HB55 503 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 TOPAZ1Q8N9V7 1692 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 GPC4O75487 556 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 KRT14P02533 472 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 KCNA3P22001 575 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 TUFMP49411 452 aaKnown RBP8.34□□□□□ -1.07
CTNND1-230ENST00000532245 SESN2P58004 480 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-230ENST00000532245 BST2Q10589 180 aaKnown RBP8.34□□□□□ -1.07
CTNND1-230ENST00000532245 GKAP1Q5VSY0 366 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-230ENST00000532245 WSCD1Q658N2 575 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 CACUL1Q86Y37 369 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 KIAA0895Q8NCT3 520 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 ZNF507Q8TCN5 953 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 CLEC4DQ8WXI8 215 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 OLA1Q9NTK5 396 aaKnown RBP8.34□□□□□ -1.07
CTNND1-230ENST00000532245 FAM105AQ9NUU6 356 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 VPS28Q9UK41 221 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 ZNF214Q9UL59 606 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-230ENST00000532245 MRPL42Q9Y6G3 142 aaKnown RBP8.34□□□□□ -1.07
CTNND1-230ENST00000532245 SMIM35A0A1B0GVV1 85 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 CCDC130P13994 396 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 MX2P20592 715 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 YWHAQP27348 245 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 KPNA2P52292 529 aaKnown RBP8.34□□□□□ -1.07
CTNND1-230ENST00000532245 TPD52P55327 224 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-230ENST00000532245 THEMIS2Q5TEJ8 643 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 RCOR2Q8IZ40 523 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 FEZF2Q8TBJ5 459 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 SLC2A14Q8TDB8 520 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 MORC4Q8TE76 937 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 ARNTL2Q8WYA1 636 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 FMO2Q99518 471 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 CINPQ9BW66 212 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-230ENST00000532245 PADI3Q9ULW8 664 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 PLA2G4CQ9UP65 541 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 C3orf70A6NLC5 250 aaPredicted RBP8.34□□□□□ -1.07
CTNND1-230ENST00000532245 SCAMP3O14828 347 aaKnown RBP8.34□□□□□ -1.07
CTNND1-230ENST00000532245 CCNE2O96020 404 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 ATP1A2P50993 1020 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 ACLYP53396 1101 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 TLE2Q04725 743 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 BRD3Q15059 726 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 USP41Q3LFD5 358 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 ZNF697Q5TEC3 545 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 ABHD15Q6UXT9 468 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 HERC6Q8IVU3 1022 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 CCDC33Q8N5R6 958 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 SMARCD1Q96GM5 515 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 PAWRQ96IZ0 340 aaKnown RBP8.34□□□□□ -1.07
CTNND1-230ENST00000532245 TMEM134Q9H6X4 195 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.34□□□□□ -1.07
CTNND1-230ENST00000532245 SLC25A13Q9UJS0 675 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 TSPAN16Q9UKR8 245 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 TNFSF13BQ9Y275 285 aa8.34□□□□□ -1.07
CTNND1-230ENST00000532245 RNASEH1O60930 286 aaKnown RBP8.34□□□□□ -1.08
CTNND1-230ENST00000532245 NFICP08651 508 aa8.34□□□□□ -1.08
CTNND1-230ENST00000532245 TROVE2P10155 538 aaKnown RBP eCLIP8.34□□□□□ -1.08
CTNND1-230ENST00000532245 ACADMP11310 421 aa8.34□□□□□ -1.08
CTNND1-230ENST00000532245 CYP2C18P33260 490 aa8.34□□□□□ -1.08
CTNND1-230ENST00000532245 NR1I3Q14994 352 aa8.34□□□□□ -1.08
CTNND1-230ENST00000532245 PSMD6Q15008 389 aa8.34□□□□□ -1.08
CTNND1-230ENST00000532245 KCTD16Q68DU8 428 aa8.34□□□□□ -1.08
CTNND1-230ENST00000532245 CCDC62Q6P9F0 684 aa8.34□□□□□ -1.08
CTNND1-230ENST00000532245 VSIG1Q86XK7 387 aa8.34□□□□□ -1.08
CTNND1-230ENST00000532245 LRRC43Q8N309 656 aa8.34□□□□□ -1.08
CTNND1-230ENST00000532245 DDX47Q9H0S4 455 aaKnown RBP8.34□□□□□ -1.08
CTNND1-230ENST00000532245 NUDT5Q9UKK9 219 aa8.34□□□□□ -1.08
CTNND1-230ENST00000532245 HPSEQ9Y251 543 aa8.34□□□□□ -1.08
CTNND1-230ENST00000532245 MRPS23Q9Y3D9 190 aaKnown RBP8.34□□□□□ -1.08
CTNND1-230ENST00000532245 CNTNAP1P78357 1384 aa8.33□□□□□ -1.08
CTNND1-230ENST00000532245 A0A087X0B3 334 aa8.33□□□□□ -1.08
CTNND1-230ENST00000532245 EFCAB14O75071 495 aa8.33□□□□□ -1.08
CTNND1-230ENST00000532245 ADH1AP07327 375 aa8.33□□□□□ -1.08
CTNND1-230ENST00000532245 CCDC15Q0P6D6 951 aa8.33□□□□□ -1.08
CTNND1-230ENST00000532245 ADIGQ0VDE8 80 aa8.33□□□□□ -1.08
CTNND1-230ENST00000532245 CCDC149Q6ZUS6 474 aa8.33□□□□□ -1.08
CTNND1-230ENST00000532245 FAM131BQ86XD5 332 aa8.33□□□□□ -1.08
CTNND1-230ENST00000532245 RNF10Q8N5U6 811 aaKnown RBP8.33□□□□□ -1.08
CTNND1-230ENST00000532245 ETNPPLQ8TBG4 499 aa8.33□□□□□ -1.08
CTNND1-230ENST00000532245 CDT1Q9H211 546 aa8.33□□□□□ -1.08
CTNND1-230ENST00000532245 NXF3Q9H4D5 531 aaKnown RBP8.33□□□□□ -1.08
CTNND1-230ENST00000532245 FBXO44Q9H4M3 255 aa8.33□□□□□ -1.08
CTNND1-230ENST00000532245 ADGRG1Q9Y653 693 aa8.33□□□□□ -1.08
CTNND1-230ENST00000532245 ATRNL1Q5VV63 1379 aa8.33□□□□□ -1.08
CTNND1-230ENST00000532245 LTBP4Q8N2S1 1624 aa8.33□□□□□ -1.08
CTNND1-230ENST00000532245 SNX2O60749 519 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms