RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 CEP250Q9BV73 2442 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 FRMD3A2A2Y4 597 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 GOLGA8IPA6NC78 632 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 GOLGA8JA6NMD2 632 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 EXTL3O43909 919 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 PRPF40AO75400 957 aaKnown RBP13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 LDHAP00338 332 aaKnown RBP13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 ITGB3P05106 788 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 RETP07949 1114 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 IDEP14735 1019 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 STAT6P42226 847 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 GPR15P49685 360 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 BFSP1Q12934 665 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 ALCAMQ13740 583 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 CCINQ13939 588 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 SIM2Q14190 667 aaPredicted RBP13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 SLC39A14Q15043 492 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 SCARA3Q6AZY7 606 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 CCDC73Q6ZRK6 1079 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 PRR23BQ6ZRT6 265 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 LONP2Q86WA8 852 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 SYNPOQ8N3V7 929 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 CSGALNACT2Q8N6G5 542 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 LRRC52Q8N7C0 313 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 MAB21L3Q8N8X9 362 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 CXorf38Q8TB03 319 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 USP13Q92995 863 aaPredicted RBP13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 FAM84AQ96KN4 292 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 FAM83CQ9BQN1 747 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 ACBD6Q9BR61 282 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 CBWD1Q9BRT8 395 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 PANK4Q9NVE7 773 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 C2orf42Q9NWW7 574 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 GDAP2Q9NXN4 497 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 CCL26Q9Y258 94 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 MORC2Q9Y6X9 1032 aaPredicted RBP13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 F5P12259 2224 aa13.78□□□□□ -0.2
TM9SF1-211ENST00000531406 A0A087X0B3 334 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 SOBPA7XYQ1 873 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 CSH1P0DML2 217 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 CSH2P0DML3 217 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 DDX6P26196 483 aaKnown RBP eCLIP13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 HOXA6P31267 233 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 CNR2P34972 360 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 AVPR1AP37288 418 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 ATXN1P54253 815 aaKnown RBP13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 RPL10AP62906 217 aaKnown RBP13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 RBP5P82980 135 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 SPEM2Q0P670 501 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 SRSF5Q13243 272 aaKnown RBP13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 DDR2Q16832 855 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 INTS6LQ5JSJ4 861 aaKnown RBP13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 SDHAF4Q5VUM1 108 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 TXNDC8Q6A555 127 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 HEATR6Q6AI08 1181 aaKnown RBP13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 MON1AQ86VX9 555 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 TMEM86AQ8N2M4 240 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 STKLD1Q8NE28 680 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 LEO1Q8WVC0 666 aaPredicted RBP13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 MRPS31Q92665 395 aaKnown RBP13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 USP28Q96RU2 1077 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 PCIF1Q9H4Z3 704 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 PDE11AQ9HCR9 933 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 ABCB6Q9NP58 842 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 HPS4Q9NQG7 708 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 TDP1Q9NUW8 608 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 DDX43Q9NXZ2 648 aaKnown RBP13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 ITGA11Q9UKX5 1188 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 CDV3Q9UKY7 258 aaKnown RBP13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 MAGED2Q9UNF1 606 aaPredicted RBP13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 DNAH14Q0VDD8 3507 aa13.77□□□□□ -0.21
TM9SF1-211ENST00000531406 PRPF6O94906 941 aaKnown RBP13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 ACAT1P24752 427 aaKnown RBP13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 CYP2F1P24903 491 aa13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 HOXC13P31276 330 aa13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 MYL7Q01449 175 aa13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 MAPK8IP2Q13387 824 aaPredicted RBP13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 RUNX3Q13761 415 aa13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 OSTM1Q86WC4 334 aa13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 NOC3LQ8WTT2 800 aaKnown RBP13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 PKMYT1Q99640 499 aa13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 TMEM206Q9H813 350 aa13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 KIF9Q9HAQ2 790 aa13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 SIX4Q9UIU6 781 aa13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 GTF3C4Q9UKN8 822 aa13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 MTMR6Q9Y217 621 aa13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 SNX9Q9Y5X1 595 aa13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 MYH11P35749 1972 aa13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 TICRRQ7Z2Z1 1910 aa13.76□□□□□ -0.21
TM9SF1-211ENST00000531406 NCOR2Q9Y618 2525 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 OTOL1A6NHN0 477 aaPredicted RBP13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 GABRDO14764 452 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 LRP3O75074 770 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 NOL4O94818 638 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 KRT19P08727 400 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 TMEM191BP0C7N4 346 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 ZNF268Q14587 947 aaPredicted RBP13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 CCDC142Q17RM4 750 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 TMEM196Q5HYL7 178 aa13.75□□□□□ -0.21
TM9SF1-211ENST00000531406 TRIM68Q6AZZ1 485 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms