RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 FBXO16Q8IX29 292 aaPredicted RBP18.14■□□□□ 0.49
BRCA2-204ENST00000530893 SHCBP1Q8NEM2 672 aa18.14■□□□□ 0.49
BRCA2-204ENST00000530893 ASB7Q9H672 318 aa18.14■□□□□ 0.49
BRCA2-204ENST00000530893 CYP3A43Q9HB55 503 aa18.14■□□□□ 0.49
BRCA2-204ENST00000530893 NXF1Q9UBU9 619 aaKnown RBP18.14■□□□□ 0.49
BRCA2-204ENST00000530893 C22orf31O95567 290 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 VIMP08670 466 aaKnown RBP18.13■□□□□ 0.49
BRCA2-204ENST00000530893 CXCL8P10145 99 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 CD19P15391 556 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 PSMA2P25787 234 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 RFC1P35251 1148 aaPredicted RBP18.13■□□□□ 0.49
BRCA2-204ENST00000530893 ZNF268Q14587 947 aaPredicted RBP18.13■□□□□ 0.49
BRCA2-204ENST00000530893 R3HDM1Q15032 1099 aaKnown RBP18.13■□□□□ 0.49
BRCA2-204ENST00000530893 EEF1DP3Q658K8 133 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 ARHGEF18Q6ZSZ5 1173 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 TDRPQ86YL5 185 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 SLC35B2Q8TB61 432 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 FHDC1Q9C0D6 1143 aaPredicted RBP18.13■□□□□ 0.49
BRCA2-204ENST00000530893 DNAJC17Q9NVM6 304 aaKnown RBP18.13■□□□□ 0.49
BRCA2-204ENST00000530893 EURLQ9NYK6 297 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 MAGEB2O15479 319 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 DDNO94850 711 aaPredicted RBP18.13■□□□□ 0.49
BRCA2-204ENST00000530893 KRT19P08727 400 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 P4HA1P13674 534 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 BRAFP15056 766 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 RDXP35241 583 aaKnown RBP18.13■□□□□ 0.49
BRCA2-204ENST00000530893 RAD23BP54727 409 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 OSTNP61366 133 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 SLC25A11Q02978 314 aaKnown RBP18.13■□□□□ 0.49
BRCA2-204ENST00000530893 MKRN3Q13064 507 aaKnown RBP18.13■□□□□ 0.49
BRCA2-204ENST00000530893 TAZQ16635 292 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 Q3C1V9 767 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 WDR72Q3MJ13 1102 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 CYP4A22Q5TCH4 519 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 CEP120Q8N960 986 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 TRAPPC12Q8WVT3 735 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 R3HDMLQ9H3Y0 253 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 SIX4Q9UIU6 781 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 NAALADL1Q9UQQ1 740 aa18.13■□□□□ 0.49
BRCA2-204ENST00000530893 MGAMO43451 1857 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 C3orf70A6NLC5 250 aaPredicted RBP18.12■□□□□ 0.49
BRCA2-204ENST00000530893 CCT8L1PA6NM43 557 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 CLCN3P51790 818 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 GPS1Q13098 491 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 CCDC142Q17RM4 750 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 TXNRD3NBQ6F5E7 133 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 DLK2Q6UY11 383 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 PPP1R21Q6ZMI0 780 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 SUGP1Q8IWZ8 645 aaKnown RBP18.12■□□□□ 0.49
BRCA2-204ENST00000530893 TTC39CQ8N584 583 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 C1orf127Q8N9H9 656 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 CLMNQ96JQ2 1002 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 C9orf72Q96LT7 481 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 PWWP2AQ96N64 755 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 MINDY3Q9H8M7 445 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 IFT122Q9HBG6 1241 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 UBN1Q9NPG3 1134 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 CTNNAL1Q9UBT7 734 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 POLIQ9UNA4 740 aa18.12■□□□□ 0.49
BRCA2-204ENST00000530893 LRCH4O75427 683 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 GABRB2P47870 512 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 IFNAR2P48551 515 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 PSMC1P62191 440 aaKnown RBP18.11■□□□□ 0.49
BRCA2-204ENST00000530893 MOGSQ13724 837 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 LAMC2Q13753 1193 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 RASA2Q15283 850 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 CKAP2Q8WWK9 683 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 SAYSD1Q9NPB0 183 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 MCM3APO60318 1980 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 GPR25O00155 361 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 SMAPO00193 183 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 CILPO75339 1184 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 HMGCRP04035 888 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 GJB1P08034 283 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 GSTA1P08263 222 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 STAG3L1P0CL83 205 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 PTPN11Q06124 597 aaPredicted RBP18.11■□□□□ 0.49
BRCA2-204ENST00000530893 RNASEH2BQ5TBB1 312 aaKnown RBP18.11■□□□□ 0.49
BRCA2-204ENST00000530893 FBXW10Q5XX13 1052 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 BBS12Q6ZW61 710 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 CENPUQ71F23 418 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 XYLT1Q86Y38 959 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 TMEM176AQ96HP8 235 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 PLCD4Q9BRC7 762 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 SYNCQ9H7C4 482 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 KCNK9Q9NPC2 374 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 NKIRAS1Q9NYS0 192 aa18.11■□□□□ 0.49
BRCA2-204ENST00000530893 COL1A2P08123 1366 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 LACTBL1A8MY62 500 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 DNM1LO00429 736 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 ALOX15BO15296 676 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 SNX3O60493 162 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 NFICP08651 508 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 IQCF3P0C7M6 154 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 PECAM1P16284 738 aaPredicted RBP18.1■□□□□ 0.49
BRCA2-204ENST00000530893 SLC18A1P54219 525 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 PLCB3Q01970 1234 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 NT5DC4Q86YG4 428 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 GLIS1Q8NBF1 620 aa18.1■□□□□ 0.49
BRCA2-204ENST00000530893 SLC4A11Q8NBS3 891 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms