RNA–Protein interactions for RNA: ENST00000530604.1

RSF1-208, Transcript of remodeling and spacing factor 1, human

TSL 2

Gene RSF1, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RSF1-208	ENST00000530604	TSPY1	Q01534	308 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	CUL4A	Q13619	759 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	NFE2	Q16621	373 aa	Predicted RBP	18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	SCARA3	Q6AZY7	606 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	BRSK2	Q8IWQ3	736 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	PDCL2	Q8N4E4	241 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	MAB21L3	Q8N8X9	362 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	C1orf127	Q8N9H9	656 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	CXorf38	Q8TB03	319 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	USP13	Q92995	863 aa	Predicted RBP	18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	SAAL1	Q96ER3	474 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	CLIC6	Q96NY7	704 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	ACBD6	Q9BR61	282 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	PI4K2A	Q9BTU6	479 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	HPS4	Q9NQG7	708 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	OLFML3	Q9NRN5	406 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	SEMA4G	Q9NTN9	838 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	TDP1	Q9NUW8	608 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	L1RE1	Q9UN81	338 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	AGAP1	Q9UPQ3	857 aa		18.84	■□□□□ 0.61
RSF1-208	ENST00000530604	OTOL1	A6NHN0	477 aa	Predicted RBP	18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	PRPF40A	O75400	957 aa	Known RBP	18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	ITGB3	P05106	788 aa		18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	CSH1	P0DML2	217 aa		18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	CSH2	P0DML3	217 aa		18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	GART	P22102	1010 aa		18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	CASP5	P51878	434 aa		18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	RUNX3	Q13761	415 aa		18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	TMEM196	Q5HYL7	178 aa		18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	TXNDC8	Q6A555	127 aa		18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	WDR5B	Q86VZ2	330 aa		18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	LRRC52	Q8N7C0	313 aa		18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	CACTIN	Q8WUQ7	758 aa	Known RBP	18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	LEO1	Q8WVC0	666 aa	Predicted RBP	18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	CHFR	Q96EP1	664 aa		18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	EBF3	Q9H4W6	596 aa		18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	PCDHB13	Q9Y5F0	798 aa		18.83	■□□□□ 0.6
RSF1-208	ENST00000530604	ATG2B	Q96BY7	2078 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	TRDMT1	O14717	391 aa	Known RBP	18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	EXTL3	O43909	919 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	GCNT3	O95395	438 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	LDHA	P00338	332 aa	Known RBP	18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	PDC	P20941	246 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	TXLNA	P40222	546 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	BFSP1	Q12934	665 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	CSRP2	Q16527	193 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	DDR2	Q16832	855 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	SDHAF4	Q5VUM1	108 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	TRIM68	Q6AZZ1	485 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	FSTL4	Q6MZW2	842 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	FAM173B	Q6P4H8	233 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	PKN3	Q6P5Z2	889 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	MON1A	Q86VX9	555 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	TMEM86A	Q8N2M4	240 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	CSGALNACT2	Q8N6G5	542 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	STKLD1	Q8NE28	680 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	RIN3	Q8TB24	985 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	NETO1	Q8TDF5	533 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	PKMYT1	Q99640	499 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	KIF9	Q9HAQ2	790 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	ABCB6	Q9NP58	842 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	GDAP2	Q9NXN4	497 aa		18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	DDX43	Q9NXZ2	648 aa	Known RBP	18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	RBAK	Q9NYW8	714 aa	Predicted RBP	18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	MAGED2	Q9UNF1	606 aa	Predicted RBP	18.82	■□□□□ 0.6
RSF1-208	ENST00000530604	FRMD3	A2A2Y4	597 aa		18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	GOLGA8IP	A6NC78	632 aa		18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	GOLGA8J	A6NMD2	632 aa		18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	TULP1	O00294	542 aa	Predicted RBP	18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	HUS1	O60921	280 aa		18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	IDE	P14735	1019 aa		18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	ACAT1	P24752	427 aa	Known RBP	18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	CYP2F1	P24903	491 aa		18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	REST	Q13127	1097 aa		18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	INTS6L	Q5JSJ4	861 aa	Known RBP	18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	PRR23C	Q6ZRP0	262 aa		18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	SYCP3	Q8IZU3	236 aa		18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	FAM160A2	Q8N612	972 aa	Predicted RBP	18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	MRPS31	Q92665	395 aa	Known RBP	18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	FAM84A	Q96KN4	292 aa		18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	MYRFL	Q96LU7	910 aa		18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	CBWD1	Q9BRT8	395 aa		18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	FGFBP2	Q9BYJ0	223 aa		18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	GTF3C4	Q9UKN8	822 aa		18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	ITGA11	Q9UKX5	1188 aa		18.81	■□□□□ 0.6
RSF1-208	ENST00000530604	TPR	P12270	2363 aa	Known RBP	18.8	■□□□□ 0.6
RSF1-208	ENST00000530604	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	18.8	■□□□□ 0.6
RSF1-208	ENST00000530604	SLC30A4	O14863	429 aa		18.8	■□□□□ 0.6
RSF1-208	ENST00000530604	NOL4	O94818	638 aa		18.8	■□□□□ 0.6
RSF1-208	ENST00000530604	RPL10A	P62906	217 aa	Known RBP	18.8	■□□□□ 0.6
RSF1-208	ENST00000530604	MYL7	Q01449	175 aa		18.8	■□□□□ 0.6
RSF1-208	ENST00000530604	CEBPZ	Q03701	1054 aa	Known RBP	18.8	■□□□□ 0.6
RSF1-208	ENST00000530604	GRSF1	Q12849	480 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
RSF1-208	ENST00000530604	ALCAM	Q13740	583 aa		18.8	■□□□□ 0.6
RSF1-208	ENST00000530604	ZNF268	Q14587	947 aa	Predicted RBP	18.8	■□□□□ 0.6
RSF1-208	ENST00000530604	CCDC73	Q6ZRK6	1079 aa		18.8	■□□□□ 0.6
RSF1-208	ENST00000530604	CEP68	Q76N32	757 aa		18.8	■□□□□ 0.6
RSF1-208	ENST00000530604	SPATA18	Q8TC71	538 aa		18.8	■□□□□ 0.6
RSF1-208	ENST00000530604	TRMT2B	Q96GJ1	504 aa	Known RBP	18.8	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms