RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 CCDC142Q17RM4 750 aa22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 DGKKQ5KSL6 1271 aa22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 TRIM68Q6AZZ1 485 aa22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 LAIR1Q6GTX8 287 aa22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 C1orf228Q6PIY5 440 aa22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 BRSK2Q8IWQ3 736 aa22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 CMTM8Q8IZV2 173 aa22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 PDCL2Q8N4E4 241 aa22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 C1orf127Q8N9H9 656 aa22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 PCIF1Q9H4Z3 704 aa22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 GKN1Q9NS71 199 aa22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 SEL1LQ9UBV2 794 aa22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 CDV3Q9UKY7 258 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 L1RE1Q9UN81 338 aa22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.34■■□□□ 1.17
TSPAN4-219ENST00000530404 MYH10P35580 1976 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 A0A087X0B3 334 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 HCRTO43612 131 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 F11P03951 625 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 GAP43P17677 238 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 WEE1P30291 646 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 NLRP12P59046 1061 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 TSPY1Q01534 308 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 POU5F1Q01860 360 aaKnown RBP22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 LMNB2Q03252 620 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 BFSP1Q12934 665 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 CCINQ13939 588 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 ITPRIPL2Q3MIP1 535 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 TXNDC8Q6A555 127 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 PKN3Q6P5Z2 889 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 RIN3Q8TB24 985 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 CBWD1Q9BRT8 395 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 HPS4Q9NQG7 708 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 RBAKQ9NYW8 714 aaPredicted RBP22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 EXOC7Q9UPT5 735 aa22.33■■□□□ 1.17
TSPAN4-219ENST00000530404 TXLNAP40222 546 aa22.32■■□□□ 1.16
TSPAN4-219ENST00000530404 PLCB2Q00722 1185 aa22.32■■□□□ 1.16
TSPAN4-219ENST00000530404 SMARCB1Q12824 385 aa22.32■■□□□ 1.16
TSPAN4-219ENST00000530404 LMBRD2Q68DH5 695 aaPredicted RBP22.32■■□□□ 1.16
TSPAN4-219ENST00000530404 OSTM1Q86WC4 334 aa22.32■■□□□ 1.16
TSPAN4-219ENST00000530404 NT5DC4Q86YG4 428 aa22.32■■□□□ 1.16
TSPAN4-219ENST00000530404 SYCP3Q8IZU3 236 aa22.32■■□□□ 1.16
TSPAN4-219ENST00000530404 USP13Q92995 863 aaPredicted RBP22.32■■□□□ 1.16
TSPAN4-219ENST00000530404 EBF3Q9H4W6 596 aa22.32■■□□□ 1.16
TSPAN4-219ENST00000530404 THG1LQ9NWX6 298 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-219ENST00000530404 DDX43Q9NXZ2 648 aaKnown RBP22.32■■□□□ 1.16
TSPAN4-219ENST00000530404 DCDC2BA2VCK2 349 aa22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 OTOL1A6NHN0 477 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 PRR5-ARHGAP8B1AHC4 643 aa22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 PRPF6O94906 941 aaKnown RBP22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 KRT19P08727 400 aa22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 SYT1P21579 422 aa22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 CYP2F1P24903 491 aa22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 AVPR1AP37288 418 aa22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 PNPLA4P41247 253 aa22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 ARHGAP8P85298 464 aa22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 DDR2Q16832 855 aa22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 LONP2Q86WA8 852 aa22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 CSGALNACT2Q8N6G5 542 aa22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 CHFRQ96EP1 664 aa22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 PDE11AQ9HCR9 933 aa22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 FOXD4L1Q9NU39 408 aa22.31■■□□□ 1.16
TSPAN4-219ENST00000530404 NUP205Q92621 2012 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 EXTL3O43909 919 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 TADA3O75528 432 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 PAPSS2O95340 614 aaPredicted RBP22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 ARSAP15289 507 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 STAT6P42226 847 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 PXNP49023 591 aaPredicted RBP22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 RUNX3Q13761 415 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 TTC16Q8NEE8 873 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 CXorf38Q8TB03 319 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 USP28Q96RU2 1077 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 FAM83CQ9BQN1 747 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 MTMR12Q9C0I1 747 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 OLFML3Q9NRN5 406 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 PANK4Q9NVE7 773 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 SIX4Q9UIU6 781 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 GTF3C4Q9UKN8 822 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 PCDHB13Q9Y5F0 798 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 SNX9Q9Y5X1 595 aa22.3■■□□□ 1.16
TSPAN4-219ENST00000530404 HUS1O60921 280 aa22.29■■□□□ 1.16
TSPAN4-219ENST00000530404 LDHAP00338 332 aaKnown RBP22.29■■□□□ 1.16
TSPAN4-219ENST00000530404 RETP07949 1114 aa22.29■■□□□ 1.16
TSPAN4-219ENST00000530404 CSH1P0DML2 217 aa22.29■■□□□ 1.16
TSPAN4-219ENST00000530404 CSH2P0DML3 217 aa22.29■■□□□ 1.16
TSPAN4-219ENST00000530404 PDCP20941 246 aa22.29■■□□□ 1.16
TSPAN4-219ENST00000530404 GARTP22102 1010 aa22.29■■□□□ 1.16
TSPAN4-219ENST00000530404 INTS6LQ5JSJ4 861 aaKnown RBP22.29■■□□□ 1.16
TSPAN4-219ENST00000530404 FSTL4Q6MZW2 842 aa22.29■■□□□ 1.16
TSPAN4-219ENST00000530404 CCDC73Q6ZRK6 1079 aa22.29■■□□□ 1.16
TSPAN4-219ENST00000530404 PDILTQ8N807 584 aa22.29■■□□□ 1.16
TSPAN4-219ENST00000530404 GLIS3Q8NEA6 775 aa22.29■■□□□ 1.16
TSPAN4-219ENST00000530404 CACTINQ8WUQ7 758 aaKnown RBP22.29■■□□□ 1.16
TSPAN4-219ENST00000530404 MRPS31Q92665 395 aaKnown RBP22.29■■□□□ 1.16
TSPAN4-219ENST00000530404 TDP1Q9NUW8 608 aa22.29■■□□□ 1.16
TSPAN4-219ENST00000530404 POLR3BQ9NW08 1133 aaPredicted RBP22.29■■□□□ 1.16
TSPAN4-219ENST00000530404 FRMD3A2A2Y4 597 aa22.28■■□□□ 1.16
TSPAN4-219ENST00000530404 SDHBP21912 280 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms