RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 POLA2Q14181 598 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 ZFP69Q49AA0 526 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 CLVS1Q8IUQ0 354 aaPredicted RBP13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 CCDC86Q9H6F5 360 aaKnown RBP13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 WDR17Q8IZU2 1322 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 VSTM4Q8IW00 320 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 ATP8A2Q9NTI2 1148 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 STOX2Q9P2F5 926 aaPredicted RBP13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 RNF123Q5XPI4 1314 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 CCDC189A1A4V9 331 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 HOXA7P31268 230 aaPredicted RBP13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 AKT1P31749 480 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 GDI2P50395 445 aaKnown RBP13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 FKBP3Q00688 224 aaKnown RBP13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 TAF13Q15543 124 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 DPCR1Q3MIW9 517 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 B3GNT6Q6ZMB0 384 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 KBTBD7Q8WVZ9 684 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 PIF1Q9H611 641 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 ANTXR1Q9H6X2 564 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 AKR1B1P15121 316 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 ZNF658Q5TYW1 1059 aaPredicted RBP13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 IZUMO2Q6UXV1 221 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 DAW1Q8N136 415 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 PCDH12Q9NPG4 1184 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 ZNF532Q9HCE3 1301 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 PRH1P02810 166 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 APRTP07741 180 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 GAP43P17677 238 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 ATP5F1P24539 256 aaPredicted RBP13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 RAD23AP54725 363 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 BNC1Q01954 994 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 ERAP2Q6P179 960 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 CLEC4GQ6UXB4 293 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 PSMA8Q8TAA3 256 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 PTPRN2Q92932 1015 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 EYA3Q99504 573 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 DGCR6LQ9BY27 220 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 TRMT13Q9NUP7 481 aaKnown RBP13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 INTS10Q9NVR2 710 aaKnown RBP13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 DUSP12Q9UNI6 340 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 MYO3BQ8WXR4 1341 aa13.14□□□□□ -0.31
PDE4DIP-227ENST00000529945 OR14I1A6ND48 311 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 RPP38P78345 283 aaKnown RBP13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 ACAP2Q15057 778 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 SEL1L3Q68CR1 1132 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 LCMT1Q9UIC8 334 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 RBM7Q9Y580 266 aaKnown RBP13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 KIF14Q15058 1648 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 EPRSP07814 1512 aaKnown RBP13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 ABCC12Q96J65 1359 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 ARID1BQ8NFD5 2236 aaPredicted RBP13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 A0A1W2PQ72 361 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 FAM220BPB1ANY3 271 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 TFE3P19532 575 aaPredicted RBP13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 ZNF699Q32M78 642 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 AFTPHQ6ULP2 937 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 HS6ST3Q8IZP7 471 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 SPAG16Q8N0X2 631 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 EFHBQ8N7U6 833 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 EPC1Q9H2F5 836 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 DBR1Q9UK59 544 aaKnown RBP13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 POLR3AO14802 1390 aaPredicted RBP13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 C2orf74A8MZ97 194 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 KMOO15229 486 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 PPP1R37O75864 691 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 DEFA5Q01523 94 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 DHX34Q14147 1143 aaKnown RBP13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 PLCL1Q15111 1095 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 SKA1Q96BD8 255 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 RPF1Q9H9Y2 349 aaKnown RBP13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 A0A087WWV3 80 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 MDM4O15151 490 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 ANXA11P50995 505 aaKnown RBP13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 CAV3P56539 151 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 CDKL1Q00532 357 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 RGS1Q08116 209 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 GSTK1Q9Y2Q3 226 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 GRID2IPA4D2P6 1211 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 KCNN4O15554 427 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 DDX39BQ13838 428 aaKnown RBP13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 C2orf76Q3KRA6 126 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 PERM1Q5SV97 790 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 EID3Q8N140 333 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 POC5Q8NA72 575 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 CEP72Q9P209 647 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 RABL2AQ9UBK7 228 aaPredicted RBP13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 SH3D21A4FU49 640 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 ALDH1A2O94788 518 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 ADAM17P78536 824 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 LONRF1Q17RB8 773 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 PGS1Q32NB8 556 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 GGA1Q9UJY5 639 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 SLC9A8Q9Y2E8 581 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 CLIC4Q9Y696 253 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 KRT24Q2M2I5 525 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 MARK2Q7KZI7 788 aaKnown RBP13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 MAFIPQ8WZ33 124 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 ADAM33Q9BZ11 813 aa13.13□□□□□ -0.31
PDE4DIP-227ENST00000529945 SLC6A15Q9H2J7 730 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms