RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 FUBP3Q96I24 572 aaKnown RBP eCLIP16.57■□□□□ 0.24
CCDC90B-215ENST00000529745 TMLHEQ9NVH6 421 aa16.57■□□□□ 0.24
CCDC90B-215ENST00000529745 SLC27A5Q9Y2P5 690 aa16.57■□□□□ 0.24
CCDC90B-215ENST00000529745 EPG5Q9HCE0 2579 aa16.57■□□□□ 0.24
CCDC90B-215ENST00000529745 ANAPC1Q9H1A4 1944 aa16.57■□□□□ 0.24
CCDC90B-215ENST00000529745 NRG2O14511 850 aaPredicted RBP16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 PDGFBP01127 241 aaPredicted RBP16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 FCARP24071 287 aa16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 ID4P47928 161 aa16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 CLCN5P51795 746 aa16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 PNOCQ13519 176 aa16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 ZACNQ401N2 412 aa16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 TDRD10Q5VZ19 366 aaKnown RBP16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 DNAJB7Q7Z6W7 309 aaPredicted RBP16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 SHKBP1Q8TBC3 707 aa16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 MCRS1Q96EZ8 462 aa16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 ASB16Q96NS5 453 aa16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 RPP25Q9BUL9 199 aaKnown RBP16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 CDH9Q9ULB4 789 aa16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 FRMD4BQ9Y2L6 1034 aa16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 ZNF638Q14966 1978 aaKnown RBP16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 KMT2BQ9UMN6 2715 aaPredicted RBP16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 MIA3Q5JRA6 1907 aa16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 GVINP1Q7Z2Y8 2422 aa16.56■□□□□ 0.24
CCDC90B-215ENST00000529745 NPR3P17342 541 aa16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 NR2F2P24468 414 aa16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 RPL13P26373 211 aaKnown RBP16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 WEE1P30291 646 aa16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 AVPR2P30518 371 aa16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 VCPP55072 806 aaKnown RBP16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 VEPH1Q14D04 833 aa16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 MGAT5BQ3V5L5 792 aa16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 C1orf220Q5T0J3 134 aa16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 ZNF658Q5TYW1 1059 aaPredicted RBP16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 CWF19L1Q69YN2 538 aaKnown RBP16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 CEP295NLQ96MC4 621 aa16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 MKNK1Q9BUB5 465 aa16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 ABI2Q9NYB9 513 aaPredicted RBP16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 ZMYM5Q9UJ78 669 aa16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 HOOK1Q9UJC3 728 aaKnown RBP16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 CACNA1GO43497 2377 aa16.55■□□□□ 0.24
CCDC90B-215ENST00000529745 KRBA1A5PL33 1030 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 SOBPA7XYQ1 873 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 SOAT2O75908 522 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 SMC2O95347 1197 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 VNN1O95497 513 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 MYL4P12829 197 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 MAGEA11P43364 429 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 MYL6P60660 151 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 DLG4P78352 724 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 TRPC3Q13507 836 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 MAPRE1Q15691 268 aaKnown RBP16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 WDR72Q3MJ13 1102 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 PHLDB3Q6NSJ2 640 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 INTS8Q75QN2 995 aaKnown RBP16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 GAREM2Q75VX8 874 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 ZC3H3Q8IXZ2 948 aaKnown RBP16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 GPR152Q8TDT2 470 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 TAF4BQ92750 862 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 SMARCD2Q92925 531 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 E2F7Q96AV8 911 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 SEPT5Q99719 369 aaPredicted RBP16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 SYT15Q9BQS2 421 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 IL21Q9HBE4 155 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 ZNF334Q9HCZ1 680 aaPredicted RBP16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 GTF3C4Q9UKN8 822 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 PCDHA5Q9Y5H7 936 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 TICRRQ7Z2Z1 1910 aa16.54■□□□□ 0.24
CCDC90B-215ENST00000529745 HELZP42694 1942 aaKnown RBP16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 PRR23AA6NEV1 266 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 H0Y858 1186 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 TULP1O00294 542 aaPredicted RBP16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 AKAP3O75969 853 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 KRT37O76014 449 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 CFHP08603 1231 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 CSH1P0DML2 217 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 CSH2P0DML3 217 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 HMGA1P17096 107 aaKnown RBP16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 AOC1P19801 751 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 ACAT1P24752 427 aaKnown RBP16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 LMO2P25791 158 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 CDC25CP30307 473 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 PSMC2P35998 433 aaKnown RBP16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 RPL10AP62906 217 aaKnown RBP16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 TNNC1P63316 161 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 GPC5P78333 572 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 PFKPQ01813 784 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 NCOA4Q13772 614 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 TEAD2Q15562 447 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 FAM78AQ5JUQ0 283 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 CEP135Q66GS9 1140 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 ASTLQ6HA08 431 aaPredicted RBP16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 TANGO2Q6ICL3 276 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 C4orf50Q6ZRC1 276 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 DEPDC1BQ8WUY9 529 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 SMARCE1Q969G3 411 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 TRMT2BQ96GJ1 504 aaKnown RBP16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 LPIN3Q9BQK8 851 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 ZFP14Q9HCL3 533 aa16.53■□□□□ 0.24
CCDC90B-215ENST00000529745 CRTAC1Q9NQ79 661 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms