RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 TNIP3Q96KP6 325 aa26.27■■□□□ 1.8
LDLRAD3-203ENST00000528989 ACBD6Q9BR61 282 aa26.27■■□□□ 1.8
LDLRAD3-203ENST00000528989 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.27■■□□□ 1.8
LDLRAD3-203ENST00000528989 VWA8A3KMH1 1905 aa26.27■■□□□ 1.8
LDLRAD3-203ENST00000528989 ARHGEF37A1IGU5 675 aa26.26■■□□□ 1.79
LDLRAD3-203ENST00000528989 TMCO5BA8MYB1 307 aa26.26■■□□□ 1.79
LDLRAD3-203ENST00000528989 NRDCO43847 1150 aa26.26■■□□□ 1.79
LDLRAD3-203ENST00000528989 BMPR1AP36894 532 aa26.26■■□□□ 1.79
LDLRAD3-203ENST00000528989 SLC18A3Q16572 532 aa26.26■■□□□ 1.79
LDLRAD3-203ENST00000528989 USP41Q3LFD5 358 aa26.26■■□□□ 1.79
LDLRAD3-203ENST00000528989 HS1BP3Q53T59 392 aa26.26■■□□□ 1.79
LDLRAD3-203ENST00000528989 MDH1BQ5I0G3 518 aa26.26■■□□□ 1.79
LDLRAD3-203ENST00000528989 THEM5Q8N1Q8 247 aa26.26■■□□□ 1.79
LDLRAD3-203ENST00000528989 CHST7Q9NS84 486 aa26.26■■□□□ 1.79
LDLRAD3-203ENST00000528989 TMLHEQ9NVH6 421 aa26.26■■□□□ 1.79
LDLRAD3-203ENST00000528989 CDH9Q9ULB4 789 aa26.26■■□□□ 1.79
LDLRAD3-203ENST00000528989 REXO2Q9Y3B8 237 aaKnown RBP26.26■■□□□ 1.79
LDLRAD3-203ENST00000528989 O00370 1275 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 SOD2P04179 222 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 PCSK1P29120 753 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 CTNNB1P35222 781 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 BMS1Q14692 1282 aaKnown RBP26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 DDX53Q86TM3 631 aaKnown RBP26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 VPS52Q8N1B4 723 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 PBX4Q9BYU1 374 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 PDCL3Q9H2J4 239 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 ALG13Q9NP73 1137 aaKnown RBP26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 TFR2Q9UP52 801 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 CLDN5O00501 218 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 PPM1AP35813 382 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 CTXN3Q4LDR2 81 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 ZNF677Q86XU0 584 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 SPATA18Q8TC71 538 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 SLC2A14Q8TDB8 520 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 AUTS2Q8WXX7 1259 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 RIN2Q8WYP3 895 aaPredicted RBP26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 NAGPAQ9UK23 515 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 TSPAN16Q9UKR8 245 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 KIAA1257Q9ULG3 409 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 TSC2P49815 1807 aa26.25■■□□□ 1.79
LDLRAD3-203ENST00000528989 KIAA1671Q9BY89 1806 aa26.24■■□□□ 1.79
LDLRAD3-203ENST00000528989 A0A0U1RQJ8 604 aa26.24■■□□□ 1.79
LDLRAD3-203ENST00000528989 RPL17P18621 184 aaKnown RBP26.24■■□□□ 1.79
LDLRAD3-203ENST00000528989 BMP8BP34820 402 aa26.24■■□□□ 1.79
LDLRAD3-203ENST00000528989 CYLC1P35663 651 aaPredicted RBP26.24■■□□□ 1.79
LDLRAD3-203ENST00000528989 CNGA2Q16280 664 aa26.24■■□□□ 1.79
LDLRAD3-203ENST00000528989 INTS6LQ5JSJ4 861 aaKnown RBP26.24■■□□□ 1.79
LDLRAD3-203ENST00000528989 KIAA1841Q6NSI8 718 aa26.24■■□□□ 1.79
LDLRAD3-203ENST00000528989 DENND1BQ6P3S1 775 aa26.24■■□□□ 1.79
LDLRAD3-203ENST00000528989 VPS36Q86VN1 386 aa26.24■■□□□ 1.79
LDLRAD3-203ENST00000528989 UBA3Q8TBC4 463 aa26.24■■□□□ 1.79
LDLRAD3-203ENST00000528989 ATRIPQ8WXE1 791 aa26.24■■□□□ 1.79
LDLRAD3-203ENST00000528989 CPA5Q8WXQ8 436 aa26.24■■□□□ 1.79
LDLRAD3-203ENST00000528989 PKMYT1Q99640 499 aa26.24■■□□□ 1.79
LDLRAD3-203ENST00000528989 PCDHA11Q9Y5I1 949 aa26.24■■□□□ 1.79
LDLRAD3-203ENST00000528989 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 EIF3CLB5ME19 914 aaKnown RBP26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 MICAL2O94851 1124 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 DNAJB2P25686 324 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 ADORA2BP29275 332 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 KRT17Q04695 432 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 ALKBH5Q6P6C2 394 aaKnown RBP26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 FAM171BQ6P995 826 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 PAQR9Q6ZVX9 377 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 FUKQ8N0W3 1084 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 WDTC1Q8N5D0 677 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 PCED1BQ96HM7 432 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 EIF3CQ99613 913 aaKnown RBP26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 CSPG5O95196 566 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 CCDC122Q5T0U0 273 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 SMYD5Q6GMV2 418 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 CHRDL2Q6WN34 429 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 TDHQ8IZJ6 230 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 C17orf53Q8N3J3 647 aaPredicted RBP26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 MYCBPAPQ8TBZ2 947 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 B3GNT5Q9BYG0 378 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 RHOBTB2Q9BYZ6 727 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 PCDHGC3Q9UN70 934 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 ADGRG1Q9Y653 693 aa26.23■■□□□ 1.79
LDLRAD3-203ENST00000528989 ADAM12O43184 909 aa26.22■■□□□ 1.79
LDLRAD3-203ENST00000528989 MED7O43513 233 aa26.22■■□□□ 1.79
LDLRAD3-203ENST00000528989 TBC1D4O60343 1298 aa26.22■■□□□ 1.79
LDLRAD3-203ENST00000528989 LCA5LO95447 670 aa26.22■■□□□ 1.79
LDLRAD3-203ENST00000528989 ARPP19P56211 112 aa26.22■■□□□ 1.79
LDLRAD3-203ENST00000528989 PLCB3Q01970 1234 aa26.22■■□□□ 1.79
LDLRAD3-203ENST00000528989 TAP1Q03518 808 aa26.22■■□□□ 1.79
LDLRAD3-203ENST00000528989 GOLGA7BQ2TAP0 167 aa26.22■■□□□ 1.79
LDLRAD3-203ENST00000528989 NAA35Q5VZE5 725 aa26.22■■□□□ 1.79
LDLRAD3-203ENST00000528989 LCLAT1Q6UWP7 414 aa26.22■■□□□ 1.79
LDLRAD3-203ENST00000528989 ANKS3Q6ZW76 656 aa26.22■■□□□ 1.79
LDLRAD3-203ENST00000528989 TTC30AQ86WT1 665 aa26.22■■□□□ 1.79
LDLRAD3-203ENST00000528989 CERS4Q9HA82 394 aa26.22■■□□□ 1.79
LDLRAD3-203ENST00000528989 NENFQ9UMX5 172 aa26.22■■□□□ 1.79
LDLRAD3-203ENST00000528989 M0QYV0 167 aa26.21■■□□□ 1.79
LDLRAD3-203ENST00000528989 CYP1A1P04798 512 aaPredicted RBP26.21■■□□□ 1.79
LDLRAD3-203ENST00000528989 UNGP13051 313 aaPredicted RBP26.21■■□□□ 1.79
LDLRAD3-203ENST00000528989 SLC39A12Q504Y0 691 aa26.21■■□□□ 1.79
LDLRAD3-203ENST00000528989 ARHGAP17Q68EM7 881 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms