RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 PTPRDP23468 1912 aa12.4□□□□□ -0.42
CCDC90B-210ENST00000528149 MTCL1Q9Y4B5 1905 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 PES1O00541 588 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 STX10O60499 249 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 LRRN2O75325 713 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 RFPL2O75678 378 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 AFPP02771 609 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 DCNP07585 359 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 CFHP08603 1231 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 OR4Q2P0C623 313 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 RFX1P22670 979 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 EEF1GP26641 437 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 GTF2H1P32780 548 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 TAF6P49848 677 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 CLCN4P51793 760 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 MCCD1P59942 119 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 RBP5P82980 135 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 TRPC3Q13507 836 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 NCOA4Q13772 614 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 MIIPQ5JXC2 388 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 VARS2Q5ST30 1063 aaKnown RBP12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 KRT39Q6A163 491 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 DCLRE1AQ6PJP8 1040 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 GAS2L3Q86XJ1 694 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 SEMA4DQ92854 862 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 HPDLQ96IR7 371 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 CLSTN3Q9BQT9 956 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 TUBGCP2Q9BSJ2 902 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 RTKNQ9BST9 563 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 PI4K2AQ9BTU6 479 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 TBC1D17Q9HA65 648 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 KCNK12Q9HB15 430 aa12.39□□□□□ -0.43
CCDC90B-210ENST00000528149 SF3B1O75533 1304 aaKnown RBP eCLIP12.38□□□□□ -0.438e-6■■■■■ 107
CCDC90B-210ENST00000528149 GOLGA6L19H0YKK7 550 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 N4BP1O75113 896 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 VNN2O95498 520 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 CST3P01034 146 aaPredicted RBP12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 CDK11BP21127 795 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 FGFR3P22607 806 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 KLRC2P26717 231 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 COPB1P53618 953 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 LILRA4P59901 499 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 NOP14P78316 857 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 LMNB2Q03252 620 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 PSMD5Q16401 504 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 ZNF699Q32M78 642 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 SV2CQ496J9 727 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 ATAT1Q5SQI0 421 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 SPOPLQ6IQ16 392 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 TMC5Q6UXY8 1006 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 SCARA5Q6ZMJ2 495 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 C1orf210Q8IVY1 113 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 LRRC52Q8N7C0 313 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 FBXL13Q8NEE6 735 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 XYLT2Q9H1B5 865 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 VPS16Q9H269 839 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 RXFP1Q9HBX9 757 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 MRPL17Q9NRX2 175 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 DLGAP2Q9P1A6 1054 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 CA14Q9ULX7 337 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 POLIQ9UNA4 740 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 R3HCC1Q9Y3T6 440 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 ZZEF1O43149 2961 aa12.38□□□□□ -0.43
CCDC90B-210ENST00000528149 CARNS1A5YM72 827 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 PRR5-ARHGAP8B1AHC4 643 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 TGM5O43548 720 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 PNPLA4P41247 253 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 AARSP49588 968 aaKnown RBP eCLIP12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 ARPP19P56211 112 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 TPM4P67936 248 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 ARHGAP8P85298 464 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 MYO1EQ12965 1108 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 USP41Q3LFD5 358 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 VWA3BQ502W6 1294 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 DSTYKQ6XUX3 929 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 APTXQ7Z2E3 356 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 MAML2Q8IZL2 1156 aaPredicted RBP12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 TTC9BQ8N6N2 239 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 ANKRD20A12PQ8NF67 263 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 PIK3R5Q8WYR1 880 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 ACSF2Q96CM8 615 aaPredicted RBP12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 SUSD3Q96L08 255 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 SENP8Q96LD8 212 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 CRACR2AQ9BSW2 395 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 TTPALQ9BTX7 342 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 IMPG2Q9BZV3 1241 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 RBSNQ9H1K0 784 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 CRISPLD1Q9H336 500 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 NDST4Q9H3R1 872 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 APOBEC3GQ9HC16 384 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 MAN1C1Q9NR34 630 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 GCNT4Q9P109 453 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 NXF1Q9UBU9 619 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 LIMA1Q9UHB6 759 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 SNX9Q9Y5X1 595 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 IRAK3Q9Y616 596 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 SPEGQ15772 3267 aa12.37□□□□□ -0.43
CCDC90B-210ENST00000528149 KPNA7A9QM74 516 aa12.36□□□□□ -0.43
CCDC90B-210ENST00000528149 CYB561D2O14569 222 aa12.36□□□□□ -0.43
CCDC90B-210ENST00000528149 ASS1P00966 412 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms