RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 VRTNQ9H8Y1 702 aa35.4■■■■□ 3.26
SSSCA1-205ENST00000527920 CDH9Q9ULB4 789 aa35.4■■■■□ 3.26
SSSCA1-205ENST00000527920 CDC25CP30307 473 aa35.39■■■■□ 3.26
SSSCA1-205ENST00000527920 PRKCQQ04759 706 aa35.39■■■■□ 3.26
SSSCA1-205ENST00000527920 TRPC3Q13507 836 aa35.39■■■■□ 3.26
SSSCA1-205ENST00000527920 FAM171BQ6P995 826 aa35.39■■■■□ 3.26
SSSCA1-205ENST00000527920 TMC2Q8TDI7 906 aa35.39■■■■□ 3.26
SSSCA1-205ENST00000527920 DEPDC1BQ8WUY9 529 aa35.39■■■■□ 3.26
SSSCA1-205ENST00000527920 DNASE1L2Q92874 299 aa35.39■■■■□ 3.26
SSSCA1-205ENST00000527920 XYLT2Q9H1B5 865 aa35.39■■■■□ 3.26
SSSCA1-205ENST00000527920 GTF3C4Q9UKN8 822 aa35.39■■■■□ 3.26
SSSCA1-205ENST00000527920 FRMD4BQ9Y2L6 1034 aa35.39■■■■□ 3.26
SSSCA1-205ENST00000527920 LRRIQ3A6PVS8 624 aaPredicted RBP35.38■■■■□ 3.25
SSSCA1-205ENST00000527920 GABRR2P28476 465 aa35.38■■■■□ 3.25
SSSCA1-205ENST00000527920 CASP4P49662 377 aa35.38■■■■□ 3.25
SSSCA1-205ENST00000527920 SNW1Q13573 536 aaKnown RBP35.38■■■■□ 3.25
SSSCA1-205ENST00000527920 MAPRE1Q15691 268 aaKnown RBP35.38■■■■□ 3.25
SSSCA1-205ENST00000527920 ARHGAP15Q53QZ3 475 aa35.38■■■■□ 3.25
SSSCA1-205ENST00000527920 ENGASEQ8NFI3 743 aa35.38■■■■□ 3.25
SSSCA1-205ENST00000527920 MMS19Q96T76 1030 aa35.38■■■■□ 3.25
SSSCA1-205ENST00000527920 SYT15Q9BQS2 421 aa35.38■■■■□ 3.25
SSSCA1-205ENST00000527920 PI4K2AQ9BTU6 479 aa35.38■■■■□ 3.25
SSSCA1-205ENST00000527920 IL21Q9HBE4 155 aa35.38■■■■□ 3.25
SSSCA1-205ENST00000527920 ZMYM5Q9UJ78 669 aa35.38■■■■□ 3.25
SSSCA1-205ENST00000527920 PI15O43692 258 aa35.37■■■■□ 3.25
SSSCA1-205ENST00000527920 RFX1P22670 979 aa35.37■■■■□ 3.25
SSSCA1-205ENST00000527920 WEE1P30291 646 aa35.37■■■■□ 3.25
SSSCA1-205ENST00000527920 RPL10AP62906 217 aaKnown RBP35.37■■■■□ 3.25
SSSCA1-205ENST00000527920 TNNC1P63316 161 aa35.37■■■■□ 3.25
SSSCA1-205ENST00000527920 FAM160A1Q05DH4 1040 aa35.37■■■■□ 3.25
SSSCA1-205ENST00000527920 TAF12Q16514 161 aa35.37■■■■□ 3.25
SSSCA1-205ENST00000527920 WDR72Q3MJ13 1102 aa35.37■■■■□ 3.25
SSSCA1-205ENST00000527920 MKNK1Q9BUB5 465 aa35.37■■■■□ 3.25
SSSCA1-205ENST00000527920 DDX23Q9BUQ8 820 aaKnown RBP35.37■■■■□ 3.25
SSSCA1-205ENST00000527920 ATXN3LQ9H3M9 355 aa35.37■■■■□ 3.25
SSSCA1-205ENST00000527920 PHACTR2O75167 634 aa35.36■■■■□ 3.25
SSSCA1-205ENST00000527920 PSMC3P17980 439 aa35.36■■■■□ 3.25
SSSCA1-205ENST00000527920 MAGEA11P43364 429 aa35.36■■■■□ 3.25
SSSCA1-205ENST00000527920 CDR1P51861 262 aa35.36■■■■□ 3.25
SSSCA1-205ENST00000527920 MYL6P60660 151 aa35.36■■■■□ 3.25
SSSCA1-205ENST00000527920 MLF2Q15773 248 aaPredicted RBP35.36■■■■□ 3.25
SSSCA1-205ENST00000527920 SLC44A4Q53GD3 710 aa35.36■■■■□ 3.25
SSSCA1-205ENST00000527920 TDRD10Q5VZ19 366 aaKnown RBP35.36■■■■□ 3.25
SSSCA1-205ENST00000527920 C4orf50Q6ZRC1 276 aa35.36■■■■□ 3.25
SSSCA1-205ENST00000527920 GCNAQ96QF7 691 aa35.36■■■■□ 3.25
SSSCA1-205ENST00000527920 TRMT61BQ9BVS5 477 aaKnown RBP35.36■■■■□ 3.25
SSSCA1-205ENST00000527920 TRPV5Q9NQA5 729 aa35.36■■■■□ 3.25
SSSCA1-205ENST00000527920 RMND1Q9NWS8 449 aa35.36■■■■□ 3.25
SSSCA1-205ENST00000527920 MYBPHLA2RUH7 354 aa35.35■■■■□ 3.25
SSSCA1-205ENST00000527920 STK25O00506 426 aa35.35■■■■□ 3.25
SSSCA1-205ENST00000527920 IKBKBO14920 756 aa35.35■■■■□ 3.25
SSSCA1-205ENST00000527920 HCRTO43612 131 aa35.35■■■■□ 3.25
SSSCA1-205ENST00000527920 C4BPAP04003 597 aaKnown RBP35.35■■■■□ 3.25
SSSCA1-205ENST00000527920 CSH1P0DML2 217 aa35.35■■■■□ 3.25
SSSCA1-205ENST00000527920 CSH2P0DML3 217 aa35.35■■■■□ 3.25
SSSCA1-205ENST00000527920 HMGA1P17096 107 aaKnown RBP35.35■■■■□ 3.25
SSSCA1-205ENST00000527920 LMO2P25791 158 aa35.35■■■■□ 3.25
SSSCA1-205ENST00000527920 ENPEPQ07075 957 aa35.35■■■■□ 3.25
SSSCA1-205ENST00000527920 BIRC3Q13489 604 aa35.35■■■■□ 3.25
SSSCA1-205ENST00000527920 VITQ6UXI7 678 aa35.35■■■■□ 3.25
SSSCA1-205ENST00000527920 SPATA2LQ8IUW3 424 aaPredicted RBP35.35■■■■□ 3.25
SSSCA1-205ENST00000527920 CCDC105Q8IYK2 499 aa35.35■■■■□ 3.25
SSSCA1-205ENST00000527920 GIPC2Q8TF65 315 aa35.35■■■■□ 3.25
SSSCA1-205ENST00000527920 CYP2F1P24903 491 aa35.34■■■■□ 3.25
SSSCA1-205ENST00000527920 ZCWPW2Q504Y3 356 aa35.34■■■■□ 3.25
SSSCA1-205ENST00000527920 CEP135Q66GS9 1140 aa35.34■■■■□ 3.25
SSSCA1-205ENST00000527920 MFSD6LQ8IWD5 586 aa35.34■■■■□ 3.25
SSSCA1-205ENST00000527920 TIGD1Q96MW7 591 aa35.34■■■■□ 3.25
SSSCA1-205ENST00000527920 GSDMAQ96QA5 445 aa35.34■■■■□ 3.25
SSSCA1-205ENST00000527920 TASP1Q9H6P5 420 aa35.34■■■■□ 3.25
SSSCA1-205ENST00000527920 CIZ1Q9ULV3 898 aaPredicted RBP35.34■■■■□ 3.25
SSSCA1-205ENST00000527920 NR2F2P24468 414 aa35.33■■■■□ 3.25
SSSCA1-205ENST00000527920 RPL13P26373 211 aaKnown RBP35.33■■■■□ 3.25
SSSCA1-205ENST00000527920 VIPR2P41587 438 aa35.33■■■■□ 3.25
SSSCA1-205ENST00000527920 PNOCQ13519 176 aa35.33■■■■□ 3.25
SSSCA1-205ENST00000527920 NCOA4Q13772 614 aa35.33■■■■□ 3.25
SSSCA1-205ENST00000527920 STXBP5Q5T5C0 1151 aa35.33■■■■□ 3.25
SSSCA1-205ENST00000527920 GPR158Q5T848 1215 aa35.33■■■■□ 3.25
SSSCA1-205ENST00000527920 IRF7Q92985 503 aa35.33■■■■□ 3.25
SSSCA1-205ENST00000527920 CEP295NLQ96MC4 621 aa35.33■■■■□ 3.25
SSSCA1-205ENST00000527920 MRPL45Q9BRJ2 306 aaKnown RBP35.33■■■■□ 3.25
SSSCA1-205ENST00000527920 SNX25Q9H3E2 840 aa35.33■■■■□ 3.25
SSSCA1-205ENST00000527920 CRTAC1Q9NQ79 661 aa35.33■■■■□ 3.25
SSSCA1-205ENST00000527920 OBP2AQ9NY56 170 aa35.33■■■■□ 3.25
SSSCA1-205ENST00000527920 MAPK8IP1Q9UQF2 711 aa35.33■■■■□ 3.25
SSSCA1-205ENST00000527920 HOXD11P31277 338 aaPredicted RBP35.32■■■■□ 3.24
SSSCA1-205ENST00000527920 GNL1P36915 607 aaPredicted RBP35.32■■■■□ 3.24
SSSCA1-205ENST00000527920 GRM2Q14416 872 aa35.32■■■■□ 3.24
SSSCA1-205ENST00000527920 CCDC142Q17RM4 750 aa35.32■■■■□ 3.24
SSSCA1-205ENST00000527920 ZACNQ401N2 412 aa35.32■■■■□ 3.24
SSSCA1-205ENST00000527920 COBLL1Q53SF7 1204 aa35.32■■■■□ 3.24
SSSCA1-205ENST00000527920 VSTM1Q6UX27 236 aa35.32■■■■□ 3.24
SSSCA1-205ENST00000527920 ARID3BQ8IVW6 561 aaPredicted RBP35.32■■■■□ 3.24
SSSCA1-205ENST00000527920 PJA1Q8NG27 643 aa35.32■■■■□ 3.24
SSSCA1-205ENST00000527920 SPATA20Q8TB22 786 aa35.32■■■■□ 3.24
SSSCA1-205ENST00000527920 TRMT2BQ96GJ1 504 aaKnown RBP35.32■■■■□ 3.24
SSSCA1-205ENST00000527920 GTPBP4Q9BZE4 634 aaKnown RBP35.32■■■■□ 3.24
SSSCA1-205ENST00000527920 OSBPL6Q9BZF3 934 aa35.32■■■■□ 3.24
SSSCA1-205ENST00000527920 BRD9Q9H8M2 597 aa35.32■■■■□ 3.24
SSSCA1-205ENST00000527920 UXTQ9UBK9 157 aaPredicted RBP35.32■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms