RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SPATA18Q8TC71 538 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 YME1L1Q96TA2 773 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 SYT15Q9BQS2 421 aa15.81■□□□□ 0.12
USP47-207ENST00000527733 NIFKQ9BYG3 293 aaKnown RBP15.81■□□□□ 0.12
USP47-207ENST00000527733 DDX43Q9NXZ2 648 aaKnown RBP15.81■□□□□ 0.12
USP47-207ENST00000527733 KPNA7A9QM74 516 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 BST2Q10589 180 aaKnown RBP15.8■□□□□ 0.12
USP47-207ENST00000527733 SLC13A5Q86YT5 568 aaPredicted RBP15.8■□□□□ 0.12
USP47-207ENST00000527733 ATP11CQ8NB49 1132 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 L3MBTL3Q96JM7 780 aaPredicted RBP15.8■□□□□ 0.12
USP47-207ENST00000527733 M0QYT0 321 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 CYBBP04839 570 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 PAEPP09466 180 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 ZBED8Q8IZ13 594 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 BTBD6Q96KE9 485 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 TRAIPQ9BWF2 469 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 OSGEPQ9NPF4 335 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 FBXO21O94952 628 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 F9P00740 461 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 HMGCRP04035 888 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 PRLRP16471 622 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 CRYBB1P53674 252 aaPredicted RBP15.8■□□□□ 0.12
USP47-207ENST00000527733 CDH8P55286 799 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 ASPHQ12797 758 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 ARHGEF26Q96DR7 871 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 CNPY3Q9BT09 278 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.8■□□□□ 0.12
USP47-207ENST00000527733 RGS17Q9UGC6 210 aaPredicted RBP15.8■□□□□ 0.12
USP47-207ENST00000527733 MAFBQ9Y5Q3 323 aaPredicted RBP15.8■□□□□ 0.12
USP47-207ENST00000527733 TLR2O60603 784 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 GMNNO75496 209 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 GJB1P08034 283 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 ITIH2P19823 946 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 C10orf120Q5SQS8 335 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 TTC19Q6DKK2 380 aaPredicted RBP15.8■□□□□ 0.12
USP47-207ENST00000527733 ELMO3Q96BJ8 720 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 TRIM51Q9BSJ1 452 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 TSPAN16Q9UKR8 245 aa15.8■□□□□ 0.12
USP47-207ENST00000527733 A0A087WUV0 522 aaPredicted RBP15.79■□□□□ 0.12
USP47-207ENST00000527733 F5H423 210 aaPredicted RBP15.79■□□□□ 0.12
USP47-207ENST00000527733 PROSCO94903 275 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 RPL10AP62906 217 aaKnown RBP15.79■□□□□ 0.12
USP47-207ENST00000527733 CENPCQ03188 943 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 YWHAHQ04917 246 aaPredicted RBP15.79■□□□□ 0.12
USP47-207ENST00000527733 RAD51Q06609 339 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 RPS6KA2Q15349 733 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 HIF1AQ16665 826 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 MDH1BQ5I0G3 518 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 SDCCAG8Q86SQ7 713 aaPredicted RBP15.79■□□□□ 0.12
USP47-207ENST00000527733 GDAP1Q8TB36 358 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 MCUR1Q96AQ8 359 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 VCPIP1Q96JH7 1222 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 KRT82Q9NSB4 513 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 MID2Q9UJV3 735 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 ZMYM2Q9UBW7 1377 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 UMODL1Q5DID0 1318 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 DDX3XO00571 662 aaKnown RBP eCLIP15.79■□□□□ 0.122e-8■■■□□ 16.4
USP47-207ENST00000527733 ADAMTS3O15072 1205 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 CA12O43570 354 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 PDK1Q15118 436 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 MCOLN2Q8IZK6 566 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 DHX33Q9H6R0 707 aaKnown RBP15.79■□□□□ 0.12
USP47-207ENST00000527733 TIMM13Q9Y5L4 95 aaPredicted RBP15.79■□□□□ 0.12
USP47-207ENST00000527733 GLI3P10071 1580 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 ZNF862O60290 1169 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 DUSP11O75319 330 aaKnown RBP15.79■□□□□ 0.12
USP47-207ENST00000527733 CIB2O75838 187 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 SLC2A3P11169 496 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 NR1H3Q13133 447 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 EEF1DP3Q658K8 133 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 RAB44Q7Z6P3 723 aaPredicted RBP15.79■□□□□ 0.12
USP47-207ENST00000527733 JAMLQ86YT9 394 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 CATSPERBQ9H7T0 1116 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 RAB6BQ9NRW1 208 aa15.79■□□□□ 0.12
USP47-207ENST00000527733 SMIM35A0A1B0GVV1 85 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 TBKBP1A7MCY6 615 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 NBPF20Q3BBV1 942 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 MRPL9Q9BYD2 267 aaKnown RBP15.78■□□□□ 0.12
USP47-207ENST00000527733 SENP6Q9GZR1 1112 aaPredicted RBP15.78■□□□□ 0.12
USP47-207ENST00000527733 FBXL5Q9UKA1 691 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 SLC45A1Q9Y2W3 748 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 BTAF1O14981 1849 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 S100BP04271 92 aaPredicted RBP15.78■□□□□ 0.12
USP47-207ENST00000527733 URODP06132 367 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 ELNP15502 786 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 PRKCIP41743 596 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 ZACNQ401N2 412 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 ARHGAP24Q8N264 748 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 MMGT1Q8N4V1 131 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 ATPAF2Q8N5M1 289 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 PFDN4Q9NQP4 134 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 B4GALT5O43286 388 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 SH3BP5O60239 455 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 KCNJ1P48048 391 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 ZSCAN26Q16670 478 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 HP1BP3Q5SSJ5 553 aaPredicted RBP15.78■□□□□ 0.12
USP47-207ENST00000527733 PPM1NQ8N819 430 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 KAT5Q92993 513 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 WDCPQ9H6R7 721 aa15.78■□□□□ 0.12
USP47-207ENST00000527733 HES2Q9Y543 173 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms