RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 NFICP08651 508 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 VCPP55072 806 aaKnown RBP16.19■□□□□ 0.18
USH1C-207ENST00000527720 CCNA1P78396 465 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 ZNF268Q14587 947 aaPredicted RBP16.19■□□□□ 0.18
USH1C-207ENST00000527720 ACAP1Q15027 740 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 OASLQ15646 514 aaKnown RBP16.19■□□□□ 0.18
USH1C-207ENST00000527720 AMHR2Q16671 573 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 P3H1Q32P28 736 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 CYP4A22Q5TCH4 519 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 KAZNQ674X7 775 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 TMEM192Q8IY95 271 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 CABS1Q96KC9 395 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 KLHL11Q9NVR0 708 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 RALGAPA2Q2PPJ7 1873 aa16.19■□□□□ 0.18
USH1C-207ENST00000527720 PSMA2P25787 234 aa16.18■□□□□ 0.18
USH1C-207ENST00000527720 IFT88Q13099 833 aa16.18■□□□□ 0.18
USH1C-207ENST00000527720 ZNF792Q3KQV3 632 aa16.18■□□□□ 0.18
USH1C-207ENST00000527720 JADE1Q6IE81 842 aa16.18■□□□□ 0.18
USH1C-207ENST00000527720 TAPT1Q6NXT6 567 aa16.18■□□□□ 0.18
USH1C-207ENST00000527720 CDR2LQ86X02 465 aaPredicted RBP16.18■□□□□ 0.18
USH1C-207ENST00000527720 MICALL1Q8N3F8 863 aa16.18■□□□□ 0.18
USH1C-207ENST00000527720 RIBC1Q8N443 379 aaPredicted RBP16.18■□□□□ 0.18
USH1C-207ENST00000527720 TTC39CQ8N584 583 aa16.18■□□□□ 0.18
USH1C-207ENST00000527720 PPTC7Q8NI37 304 aa16.18■□□□□ 0.18
USH1C-207ENST00000527720 CXorf38Q8TB03 319 aa16.18■□□□□ 0.18
USH1C-207ENST00000527720 ARHGEF2Q92974 986 aaKnown RBP16.18■□□□□ 0.18
USH1C-207ENST00000527720 L3MBTL3Q96JM7 780 aaPredicted RBP16.18■□□□□ 0.18
USH1C-207ENST00000527720 ZNF668Q96K58 619 aaPredicted RBP16.18■□□□□ 0.18
USH1C-207ENST00000527720 TTC25Q96NG3 672 aa16.18■□□□□ 0.18
USH1C-207ENST00000527720 FAM118BQ9BPY3 351 aa16.18■□□□□ 0.18
USH1C-207ENST00000527720 PDZD7Q9H5P4 517 aa16.18■□□□□ 0.18
USH1C-207ENST00000527720 LRRD1A4D1F6 860 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 CDH16O75309 829 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 CILPO75339 1184 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 RFC1P35251 1148 aaPredicted RBP16.17■□□□□ 0.18
USH1C-207ENST00000527720 GABRB2P47870 512 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 LIG3P49916 1009 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 SLC25A11Q02978 314 aaKnown RBP16.17■□□□□ 0.18
USH1C-207ENST00000527720 PTPN11Q06124 597 aaPredicted RBP16.17■□□□□ 0.18
USH1C-207ENST00000527720 MORF4L2Q15014 288 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 CNGA2Q16280 664 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 TTC31Q49AM3 519 aaPredicted RBP16.17■□□□□ 0.18
USH1C-207ENST00000527720 TMEM63BQ5T3F8 832 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 NT5DC4Q86YG4 428 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 TTC13Q8NBP0 860 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 SLC4A11Q8NBS3 891 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 TPX2Q9ULW0 747 aaKnown RBP16.17■□□□□ 0.18
USH1C-207ENST00000527720 A0A087WZ62 844 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 STAU1O95793 577 aaKnown RBP16.17■□□□□ 0.18
USH1C-207ENST00000527720 ITGB3P05106 788 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 RAP1GAPP47736 663 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 PSMC1P62191 440 aaKnown RBP16.17■□□□□ 0.18
USH1C-207ENST00000527720 GPRC5AQ8NFJ5 357 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 TMEM176AQ96HP8 235 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 RBM15Q96T37 977 aaKnown RBP eCLIP16.17■□□□□ 0.18
USH1C-207ENST00000527720 FDXACB1Q9BRP7 624 aaPredicted RBP16.17■□□□□ 0.18
USH1C-207ENST00000527720 SDCBP2Q9H190 292 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 EFCC1Q9HA90 598 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 PCDH9Q9HC56 1237 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 CYTH4Q9UIA0 394 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 ACTL7BQ9Y614 415 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 TRIP11Q15643 1979 aa16.17■□□□□ 0.18
USH1C-207ENST00000527720 C3orf70A6NLC5 250 aaPredicted RBP16.16■□□□□ 0.18
USH1C-207ENST00000527720 LRCH4O75427 683 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 HMGCRP04035 888 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 VDRP11473 427 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 MAGEA4P43358 317 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 ARSEP51690 589 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 IGBP1P78318 339 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 TAZQ16635 292 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 LDLRAD1Q5T700 205 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 TXNRD3NBQ6F5E7 133 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 CCDC121Q6ZUS5 278 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 ZNF467Q7Z7K2 595 aaPredicted RBP16.16■□□□□ 0.18
USH1C-207ENST00000527720 XYLT1Q86Y38 959 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 SLC35B2Q8TB61 432 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 CFAP57Q96MR6 1250 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 FHDC1Q9C0D6 1143 aaPredicted RBP16.16■□□□□ 0.18
USH1C-207ENST00000527720 NSRP1Q9H0G5 558 aaKnown RBP16.16■□□□□ 0.18
USH1C-207ENST00000527720 ACTR5Q9H9F9 607 aaPredicted RBP16.16■□□□□ 0.18
USH1C-207ENST00000527720 C2CD2Q9Y426 696 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 UTRNP46939 3433 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 GOLGA8SH3BPF8 625 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 PPARDQ03181 441 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 DPY19L2Q6NUT2 758 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 MAMDC4Q6UXC1 1216 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 PCGF5Q86SE9 256 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 FBXO41Q8TF61 875 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 ZBTB10Q96DT7 871 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 MCRS1Q96EZ8 462 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 CPXM1Q96SM3 734 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 PRMT1Q99873 361 aaKnown RBP16.16■□□□□ 0.18
USH1C-207ENST00000527720 PHACTR1Q9C0D0 580 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 SYNCQ9H7C4 482 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 DNAJC17Q9NVM6 304 aaKnown RBP16.16■□□□□ 0.18
USH1C-207ENST00000527720 ITGA11Q9UKX5 1188 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 KIAA1257Q9ULG3 409 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.16■□□□□ 0.18
USH1C-207ENST00000527720 SHOC2Q9UQ13 582 aa16.16■□□□□ 0.18
USH1C-207ENST00000527720 AKT3Q9Y243 479 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms