RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 VNN1O95497 513 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 VNN2O95498 520 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 FGFR1OPO95684 399 aaKnown RBP14.3□□□□□ -0.12
CAPN1-209ENST00000527469 FAM163BP0C2L3 166 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 HAPLN1P10915 354 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-209ENST00000527469 CD44P16070 742 aaKnown RBP14.3□□□□□ -0.12
CAPN1-209ENST00000527469 MXI1P50539 228 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 PMS1P54277 932 aaKnown RBP14.3□□□□□ -0.12
CAPN1-209ENST00000527469 CYP27A1Q02318 531 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 TDGQ13569 410 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 SCN4BQ8IWT1 228 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 TTC9BQ8N6N2 239 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 NXPE3Q969Y0 559 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 MCRS1Q96EZ8 462 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 CEP63Q96MT8 703 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 XYLT2Q9H1B5 865 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 SMYD3Q9H7B4 428 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 VRTNQ9H8Y1 702 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 METTL14Q9HCE5 456 aaKnown RBP14.3□□□□□ -0.12
CAPN1-209ENST00000527469 ABCB6Q9NP58 842 aa14.3□□□□□ -0.12
CAPN1-209ENST00000527469 AVENQ9NQS1 362 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-209ENST00000527469 MAGEC2Q9UBF1 373 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-209ENST00000527469 MYBPHLA2RUH7 354 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 PPP1R3GB7ZBB8 358 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 HCRTO43612 131 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 CEBPBP17676 345 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 LMO2P25791 158 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 ANXA13P27216 316 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 RAP1GAPP47736 663 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 STX17P56962 302 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 PPP3CAQ08209 521 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 SLC5A9Q2M3M2 681 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 ARHGAP15Q53QZ3 475 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 MDH1BQ5I0G3 518 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 WDR44Q5JSH3 913 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 C1orf220Q5T0J3 134 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 TRIM67Q6ZTA4 783 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 LIMS2Q7Z4I7 341 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 DNAJB7Q7Z6W7 309 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-209ENST00000527469 NPAS3Q8IXF0 933 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 HS6ST3Q8IZP7 471 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 TAS1R2Q8TE23 839 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 GIPC2Q8TF65 315 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 PSMG2Q969U7 264 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 FUBP3Q96I24 572 aaKnown RBP eCLIP14.29□□□□□ -0.12
CAPN1-209ENST00000527469 TNIP3Q96KP6 325 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 LPIN3Q9BQK8 851 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 TMLHEQ9NVH6 421 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 FBXL21Q9UKT6 434 aa14.29□□□□□ -0.12
CAPN1-209ENST00000527469 ATP8B3O60423 1300 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 GPR37L1O60883 481 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 ATP2C2O75185 946 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 MICAL2O94851 1124 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 ASS1P00966 412 aaKnown RBP14.28□□□□□ -0.12
CAPN1-209ENST00000527469 BMP6P22004 513 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 CYP2F1P24903 491 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 NOP14P78316 857 aaKnown RBP14.28□□□□□ -0.12
CAPN1-209ENST00000527469 SIGLEC14Q08ET2 396 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 CETN1Q12798 172 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 TPD52L1Q16890 204 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-209ENST00000527469 FRMD5Q7Z6J6 570 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 FBXL13Q8NEE6 735 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 MYCBPAPQ8TBZ2 947 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 GPR152Q8TDT2 470 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 RSAD2Q8WXG1 361 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 MYLPFQ96A32 169 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 ELMO3Q96BJ8 720 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 TCEAL4Q96EI5 215 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 ATXN3LQ9H3M9 355 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 LMBRD1Q9NUN5 540 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 DACH1Q9UI36 760 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 MAGED2Q9UNF1 606 aaPredicted RBP14.28□□□□□ -0.12
CAPN1-209ENST00000527469 NUMBLQ9Y6R0 609 aa14.28□□□□□ -0.12
CAPN1-209ENST00000527469 A0A1W2PRU2 124 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 GNA14O95837 355 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 CSH1P0DML2 217 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 CSH2P0DML3 217 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 PTPN1P18031 435 aaKnown RBP14.27□□□□□ -0.13
CAPN1-209ENST00000527469 ATF6P18850 670 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 RFX1P22670 979 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 GABRR2P28476 465 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 CDC25CP30307 473 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 GRIK1P39086 918 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 EPHA5P54756 1037 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 CDH8P55286 799 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 HTR4Q13639 388 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 TEAD2Q15562 447 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 DDR2Q16832 855 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 CFAP221Q4G0U5 840 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 PRSS36Q5K4E3 855 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 SPOPLQ6IQ16 392 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 TTI2Q6NXR4 508 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 VSTM1Q6UX27 236 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 FILIP1Q7Z7B0 1213 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 CREBRFQ8IUR6 639 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 ZC3H3Q8IXZ2 948 aaKnown RBP14.27□□□□□ -0.13
CAPN1-209ENST00000527469 MLKLQ8NB16 471 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 B3GALNT2Q8NCR0 500 aa14.27□□□□□ -0.13
CAPN1-209ENST00000527469 ST13P5Q8NFI4 369 aaPredicted RBP14.27□□□□□ -0.13
CAPN1-209ENST00000527469 MED10Q9BTT4 135 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms