RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 SRGNP10124 158 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 TGFB3P10600 412 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 NAGAP17050 411 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 DDX5P17844 614 aaKnown RBP6.1□□□□□ -1.43
CD44-225ENST00000527326 SLC5A2P31639 672 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 CXCR5P32302 372 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 MAGEA1P43355 309 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 HIRAP54198 1017 aaPredicted RBP6.1□□□□□ -1.43
CD44-225ENST00000527326 STX17P56962 302 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 DSTNP60981 165 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 IL9RQ01113 521 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 LRRC63Q05C16 580 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 CDK18Q07002 472 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 PTK2BQ14289 1009 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 SF3B3Q15393 1217 aaKnown RBP6.1□□□□□ -1.43
CD44-225ENST00000527326 KCNJ8Q15842 424 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 CLUL1Q15846 466 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 TMEM266Q2M3C6 531 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 EDRF1Q3B7T1 1238 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 USP41Q3LFD5 358 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 NADK2Q4G0N4 442 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 KCTD21Q4G0X4 260 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 CDONQ4KMG0 1287 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 CEP78Q5JTW2 689 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 CYP4A22Q5TCH4 519 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 MEI1Q5TIA1 1274 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 UGT2A3Q6UWM9 527 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 C4orf22Q6V702 233 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 AGMOQ6ZNB7 445 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 RGS9BPQ6ZS82 235 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 RFPL4BQ6ZWI9 263 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 ARPINQ7Z6K5 226 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 RAB44Q7Z6P3 723 aaPredicted RBP6.1□□□□□ -1.43
CD44-225ENST00000527326 ZNF410Q86VK4 478 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 OSTM1Q86WC4 334 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 RASSF3Q86WH2 238 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 HEATR4Q86WZ0 1026 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 GLYCTKQ8IVS8 523 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 MARVELD2Q8N4S9 558 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 CPSF7Q8N684 471 aaKnown RBP6.1□□□□□ -1.43
CD44-225ENST00000527326 PCYOX1LQ8NBM8 494 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 ZNF507Q8TCN5 953 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 HCAR2Q8TDS4 363 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 SNX29Q8TEQ0 813 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 OSCP1Q8WVF1 389 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 LPIN2Q92539 896 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 PGBD4Q96DM1 585 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 CDHR1Q96JP9 859 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 PHACTR3Q96KR7 559 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 SUSD3Q96L08 255 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 FSD1Q9BTV5 496 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 PHF20Q9BVI0 1012 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 PITPNM3Q9BZ71 974 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 TTYH3Q9C0H2 523 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 MTFR1LQ9H019 292 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 KLC2Q9H0B6 622 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 NT5C3AQ9H0P0 336 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 NEUROG2Q9H2A3 272 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 SNX25Q9H3E2 840 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 EBF3Q9H4W6 596 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 ZNF287Q9HBT7 754 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 BRD7Q9NPI1 651 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 GPR108Q9NPR9 543 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 NKIRAS1Q9NYS0 192 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 RRN3Q9NYV6 651 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 HACD3Q9P035 362 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 IGSF9Q9P2J2 1179 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 ZFP69BQ9UJL9 534 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 TFR2Q9UP52 801 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 KCNH4Q9UQ05 1017 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 CHKBQ9Y259 395 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 PCDHB4Q9Y5E5 795 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 DUSP10Q9Y6W6 482 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 STRCP1A6NGW2 1772 aa6.1□□□□□ -1.43
CD44-225ENST00000527326 MYO5AQ9Y4I1 1855 aaKnown RBP6.09□□□□□ -1.43
CD44-225ENST00000527326 SSU72P8A0A1W2PR75 194 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 RSPH10B2B2RC85 870 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 B8ZZF3 427 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 K7EPI3 171 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 M0QX08 132 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 ZNF701M0R085 212 aaPredicted RBP6.09□□□□□ -1.43
CD44-225ENST00000527326 M0R2N6 131 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 KPNA4O00629 521 aaPredicted RBP6.09□□□□□ -1.43
CD44-225ENST00000527326 RASGRF2O14827 1237 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 GYG2O15488 501 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 GSC2O15499 205 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 POLR2DO15514 142 aaKnown RBP6.09□□□□□ -1.43
CD44-225ENST00000527326 DENRO43583 198 aaKnown RBP6.09□□□□□ -1.43
CD44-225ENST00000527326 FOXD2O60548 495 aaPredicted RBP6.09□□□□□ -1.43
CD44-225ENST00000527326 EXOC3O60645 756 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 KCNJ13O60928 360 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 TMCC2O75069 709 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 GUCY1B2O75343 617 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 CSDE1O75534 798 aaKnown RBP6.09□□□□□ -1.43
CD44-225ENST00000527326 RSL1D1O76021 490 aaKnown RBP6.09□□□□□ -1.43
CD44-225ENST00000527326 HAUS5O94927 633 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 FUCA1P04066 466 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 TFAP2AP05549 437 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 FYNP06241 537 aa6.09□□□□□ -1.43
CD44-225ENST00000527326 RSPH10BP0C881 870 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms