RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 TMEM86AQ8N2M4 240 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 XXYLT1Q8NBI6 393 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 FAM200AQ8TCP9 573 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 DNASE1L2Q92874 299 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 CCDC127Q96BQ5 260 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 ANKRD36BP1Q96IX9 119 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 SPATA32Q96LK8 384 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 SLC46A2Q9BY10 475 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 GPR88Q9GZN0 384 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 SMG9Q9H0W8 520 aaKnown RBP11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 SLITRK6Q9H5Y7 841 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 BRD9Q9H8M2 597 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 KIAA1586Q9HCI6 787 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 GTF3C4Q9UKN8 822 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 PCDHB5Q9Y5E4 795 aa11.21□□□□□ -0.61
PRPF40B-204ENST00000527253 EP300Q09472 2414 aaPredicted RBP11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 GVINP1Q7Z2Y8 2422 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 GPR179Q6PRD1 2367 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 GFRA3O60609 400 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 PRPF40AO75400 957 aaKnown RBP11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 PRAMEF12O95522 483 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 TNNC2P02585 160 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 F11P03951 625 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 PRR29P0C7W0 189 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 DLATP10515 647 aaKnown RBP11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 CASP4P49662 377 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 NDUFA8P51970 172 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 SNRPFP62306 86 aaKnown RBP11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 TSPY1Q01534 308 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 DDR2Q16832 855 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 FAM171BQ6P995 826 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 CEP57L1Q8IYX8 460 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 ADGRF2Q8IZF7 708 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 DEPDC1BQ8WUY9 529 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 CLDN23Q96B33 292 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 CGRRF1Q99675 332 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 MRPL45Q9BRJ2 306 aaKnown RBP11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 OSBPL6Q9BZF3 934 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 KCTD10Q9H3F6 313 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 GOLPH3LQ9H4A5 285 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 TASP1Q9H6P5 420 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 CRTAC1Q9NQ79 661 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 TRPV5Q9NQA5 729 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 DMAC2Q9NW81 257 aa11.2□□□□□ -0.62
PRPF40B-204ENST00000527253 MIA3Q5JRA6 1907 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 PRR23AA6NEV1 266 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 ZNF263O14978 683 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 FGF19O95750 216 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 SP9P0CG40 484 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 TNNI1P19237 187 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 WARSP23381 471 aaKnown RBP11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 WEE1P30291 646 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 LHX1P48742 406 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 NLRP12P59046 1061 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 MYL6P60660 151 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 PSMC1P62191 440 aaKnown RBP11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 KRT85P78386 507 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 MYL7Q01449 175 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 FCHO2Q0JRZ9 810 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 MYO1EQ12965 1108 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 VEPH1Q14D04 833 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 NFE2Q16621 373 aaPredicted RBP11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 WDR44Q5JSH3 913 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 ZNF852Q6ZMS4 543 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 DPH6Q7L8W6 267 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 HS2ST1Q7LGA3 356 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 C1orf210Q8IVY1 113 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 SPATA18Q8TC71 538 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 IRF7Q92985 503 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 ELMO3Q96BJ8 720 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 ZFYVE19Q96K21 471 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 SYT15Q9BQS2 421 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 GDPD2Q9HCC8 539 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 R4GN57 208 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 TICRRQ7Z2Z1 1910 aa11.19□□□□□ -0.62
PRPF40B-204ENST00000527253 SLC38A8A6NNN8 435 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 LRRIQ3A6PVS8 624 aaPredicted RBP11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 CHADO15335 359 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 EXOC3O60645 756 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 TADA3O75528 432 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 NOL4O94818 638 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 RPN1P04843 607 aaKnown RBP11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 PDGFRBP09619 1106 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 CDC25CP30307 473 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 SYKP43405 635 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 SOX9P48436 509 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 DLG4P78352 724 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 PSMD2Q13200 908 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 ARHGAP15Q53QZ3 475 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 TXNDC8Q6A555 127 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 FSIP1Q8NA03 581 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 TTC8Q8TAM2 541 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 RIN3Q8TB24 985 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 E2F7Q96AV8 911 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 NELL2Q99435 816 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 BCO2Q9BYV7 579 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 XYLT2Q9H1B5 865 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 ABCB6Q9NP58 842 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 EXOC1Q9NV70 894 aa11.18□□□□□ -0.62
PRPF40B-204ENST00000527253 CGNQ9P2M7 1197 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms