RNA–Protein interactions for RNA: ENST00000527047.5

PSMD13-206, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,284 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-206ENST00000527047 CDH8P55286 799 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 TPM4P67936 248 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 FANCCQ00597 558 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 INCA1Q0VD86 236 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 CUL2Q13617 745 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 KCNC3Q14003 757 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 COL19A1Q14993 1142 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 NR1I3Q14994 352 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 CTXN3Q4LDR2 81 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 ZNF280DQ6N043 979 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 PHLDB3Q6NSJ2 640 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 BRICD5Q6PL45 260 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 METTL23Q86XA0 190 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 UBR7Q8N806 425 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 MICAL1Q8TDZ2 1067 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 MYLIPQ8WY64 445 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 HLA-CQ95604 372 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 NAP1L5Q96NT1 182 aaPredicted RBP12.61□□□□□ -0.39
PSMD13-206ENST00000527047 NT5C1BQ96P26 610 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 MMS19Q96T76 1030 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 GAS2L1Q99501 681 aaPredicted RBP12.61□□□□□ -0.39
PSMD13-206ENST00000527047 PKMYT1Q99640 499 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 ARID3AQ99856 593 aa12.61□□□□□ -0.39
PSMD13-206ENST00000527047 NSUN3Q9H649 340 aaKnown RBP12.61□□□□□ -0.39
PSMD13-206ENST00000527047 OR6C75A6NL08 312 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 HCRTO43612 131 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 CLASP2O75122 1294 aaKnown RBP12.6□□□□□ -0.39
PSMD13-206ENST00000527047 CSPG5O95196 566 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 WEE2P0C1S8 567 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 LMO2P25791 158 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 RAP1GAPP47736 663 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 NDUFV1P49821 464 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 APBA1Q02410 837 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 GCNT1Q02742 428 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 LRMPQ12912 555 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 RAB33AQ14088 237 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 DUSP6Q16828 381 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 TCEAL5Q5H9L2 206 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 FKBP15Q5T1M5 1219 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 LILRA6Q6PI73 481 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 SCARA5Q6ZMJ2 495 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 ARHGEF19Q8IW93 802 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 SLC22A17Q8WUG5 538 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 KAT5Q92993 513 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 KREMEN1Q96MU8 473 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 ACBD6Q9BR61 282 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 REPIN1Q9BWE0 567 aaKnown RBP12.6□□□□□ -0.39
PSMD13-206ENST00000527047 EMILIN2Q9BXX0 1053 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 ZCWPW1Q9H0M4 648 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 PLCB1Q9NQ66 1216 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 DDX43Q9NXZ2 648 aaKnown RBP12.6□□□□□ -0.39
PSMD13-206ENST00000527047 APEX2Q9UBZ4 518 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 STXBP5LQ9Y2K9 1186 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 CDY1Q9Y6F8 540 aa12.6□□□□□ -0.39
PSMD13-206ENST00000527047 PES1O00541 588 aaKnown RBP12.59□□□□□ -0.39
PSMD13-206ENST00000527047 TEX33O43247 280 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 CILPO75339 1184 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 NOL4O94818 638 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 ABLIM3O94929 683 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 VNN2O95498 520 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 ADH1AP07327 375 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 ACO1P21399 889 aaKnown RBP12.59□□□□□ -0.39
PSMD13-206ENST00000527047 TBXAS1P24557 533 aaPredicted RBP12.59□□□□□ -0.39
PSMD13-206ENST00000527047 OR1D2P34982 312 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 GNL1P36915 607 aaPredicted RBP12.59□□□□□ -0.39
PSMD13-206ENST00000527047 CLCN4P51793 760 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 ROR1Q01973 937 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 UBXN1Q04323 297 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 HYAL1Q12794 435 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 SYCP1Q15431 976 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 LRRTM3Q86VH5 581 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 UNC93AQ86WB7 457 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 THEM5Q8N1Q8 247 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 VN1R2Q8NFZ6 395 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 WHAMMQ8TF30 809 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 JAKMIP2Q96AA8 810 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 TMEM209Q96SK2 561 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 CDCA3Q99618 268 aaPredicted RBP12.59□□□□□ -0.39
PSMD13-206ENST00000527047 TLE6Q9H808 572 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 CISHQ9NSE2 258 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 BARX2Q9UMQ3 279 aaPredicted RBP12.59□□□□□ -0.39
PSMD13-206ENST00000527047 CNTN6Q9UQ52 1028 aa12.59□□□□□ -0.39
PSMD13-206ENST00000527047 A0A1W2PQC6 194 aa12.58□□□□□ -0.4
PSMD13-206ENST00000527047 WDR27A2RRH5 827 aa12.58□□□□□ -0.4
PSMD13-206ENST00000527047 PER2O15055 1255 aa12.58□□□□□ -0.4
PSMD13-206ENST00000527047 SERPINC1P01008 464 aa12.58□□□□□ -0.4
PSMD13-206ENST00000527047 IGFBP4P22692 258 aa12.58□□□□□ -0.4
PSMD13-206ENST00000527047 ACAT1P24752 427 aaKnown RBP12.58□□□□□ -0.4
PSMD13-206ENST00000527047 PCSK1P29120 753 aa12.58□□□□□ -0.4
PSMD13-206ENST00000527047 GTF2F1P35269 517 aaKnown RBP eCLIP12.58□□□□□ -0.4
PSMD13-206ENST00000527047 PBX1P40424 430 aa12.58□□□□□ -0.4
PSMD13-206ENST00000527047 NRIP1P48552 1158 aa12.58□□□□□ -0.4
PSMD13-206ENST00000527047 KLK7P49862 253 aa12.58□□□□□ -0.4
PSMD13-206ENST00000527047 NDST1P52848 882 aa12.58□□□□□ -0.4
PSMD13-206ENST00000527047 GPR17Q13304 367 aa12.58□□□□□ -0.4
PSMD13-206ENST00000527047 CTC1Q2NKJ3 1217 aa12.58□□□□□ -0.4
PSMD13-206ENST00000527047 FILIP1LQ4L180 1135 aa12.58□□□□□ -0.4
PSMD13-206ENST00000527047 INTS6LQ5JSJ4 861 aaKnown RBP12.58□□□□□ -0.4
PSMD13-206ENST00000527047 KLHDC7AQ5VTJ3 777 aa12.58□□□□□ -0.4
PSMD13-206ENST00000527047 FAM171BQ6P995 826 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms