RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 RASA4BC9J798 803 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 ALOX15BO15296 676 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 RASA4O43374 803 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 FOXN2P32314 431 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 WDR4P57081 412 aaKnown RBP21.47■■□□□ 1.03
SMIM3-201ENST00000526627 FAM133BQ5BKY9 247 aaKnown RBP21.47■■□□□ 1.03
SMIM3-201ENST00000526627 CELF3Q5SZQ8 465 aaKnown RBP21.47■■□□□ 1.03
SMIM3-201ENST00000526627 TRABD2AQ86V40 505 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 RHPN2Q8IUC4 686 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 TMEM192Q8IY95 271 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 PRCCQ92733 491 aaPredicted RBP21.47■■□□□ 1.03
SMIM3-201ENST00000526627 TTC25Q96NG3 672 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 TGS1Q96RS0 853 aaKnown RBP21.47■■□□□ 1.03
SMIM3-201ENST00000526627 C2orf40Q9H1Z8 148 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 LHX5Q9H2C1 402 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 PCDH9Q9HC56 1237 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 GGT7Q9UJ14 662 aa21.47■■□□□ 1.03
SMIM3-201ENST00000526627 EXOC1LA0A1B0GW35 172 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 SIGLEC16A6NMB1 481 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 GOLGA8SH3BPF8 625 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 ACKR2O00590 384 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 LRCH4O75427 683 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 UBOX5O94941 541 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 STX2P32856 288 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 ATF7IP2Q5U623 682 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 ARHGEF18Q6ZSZ5 1173 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 PLPPR4Q7Z2D5 763 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 ZBTB10Q96DT7 871 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 SDCBP2Q9H190 292 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 SAE1Q9UBE0 346 aaPredicted RBP21.46■■□□□ 1.03
SMIM3-201ENST00000526627 NXF1Q9UBU9 619 aaKnown RBP21.46■■□□□ 1.03
SMIM3-201ENST00000526627 SIX4Q9UIU6 781 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 CEP83Q9Y592 693 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 MGRN1O60291 552 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 TAC1P20366 129 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 PSMA2P25787 234 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 TAZQ16635 292 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 SPATA21Q7Z572 469 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 BCO2Q9BYV7 579 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 NKIRAS1Q9NYS0 192 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 STRIP2Q9ULQ0 834 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 SHOC2Q9UQ13 582 aa21.46■■□□□ 1.03
SMIM3-201ENST00000526627 OTOFQ9HC10 1997 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 SUN1O94901 812 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 TNNC2P02585 160 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 RAD23BP54727 409 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 YWHAEP62258 255 aaKnown RBP21.45■■□□□ 1.02
SMIM3-201ENST00000526627 ELF3P78545 371 aaPredicted RBP21.45■■□□□ 1.02
SMIM3-201ENST00000526627 ZKSCAN8Q15776 578 aaPredicted RBP21.45■■□□□ 1.02
SMIM3-201ENST00000526627 SMTNL2Q2TAL5 461 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 PPP1R21Q6ZMI0 780 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 MINDY3Q9H8M7 445 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 FARP1Q9Y4F1 1045 aaPredicted RBP21.45■■□□□ 1.02
SMIM3-201ENST00000526627 SGK1O00141 431 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 CHUKO15111 745 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 PGK2P07205 417 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 KRT3P12035 628 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 CDH8P55286 799 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 LACTBP83111 547 aaPredicted RBP21.45■■□□□ 1.02
SMIM3-201ENST00000526627 SMYD5Q6GMV2 418 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 GADL1Q6ZQY3 521 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 DENND1AQ8TEH3 1009 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 ANKRD36BP1Q96IX9 119 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 NLRP4Q96MN2 994 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 CDT1Q9H211 546 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 C10orf88Q9H8K7 445 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 ZWILCHQ9H900 591 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 EFR3BQ9Y2G0 817 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 ARL2BPQ9Y2Y0 163 aa21.45■■□□□ 1.02
SMIM3-201ENST00000526627 FAM47DPA6NHR8 397 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 IQCF3P0C7M6 154 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 CXCL8P10145 99 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 CD19P15391 556 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 GDF10P55107 478 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 GAD2Q05329 585 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 MKRN3Q13064 507 aaKnown RBP21.44■■□□□ 1.02
SMIM3-201ENST00000526627 ACTL9Q8TC94 416 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 FNIP1Q8TF40 1166 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 CPXM1Q96SM3 734 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 INO80B-WBP1J3KQ70 363 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 BANF1O75531 89 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 ASMTLO95671 621 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 OTUD4Q01804 1114 aaKnown RBP21.44■■□□□ 1.02
SMIM3-201ENST00000526627 MBTD1Q05BQ5 628 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 ORC1Q13415 861 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 SNCBQ16143 134 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 PKN2Q16513 984 aaKnown RBP21.44■■□□□ 1.02
SMIM3-201ENST00000526627 KCNT1Q5JUK3 1230 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 C1orf127Q8N9H9 656 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 TWNKQ96RR1 684 aa21.44■■□□□ 1.02
SMIM3-201ENST00000526627 INO80BQ9C086 356 aaPredicted RBP21.44■■□□□ 1.02
SMIM3-201ENST00000526627 POC1B-GALNT4F8VUJ3 575 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 SPAG7O75391 227 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 IFNB1P01574 187 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 ERBB2P04626 1255 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 GSCP56915 257 aaPredicted RBP21.43■■□□□ 1.02
SMIM3-201ENST00000526627 NCALDP61601 193 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 PSMC1P62191 440 aaKnown RBP21.43■■□□□ 1.02
SMIM3-201ENST00000526627 DYNLT1P63172 113 aa21.43■■□□□ 1.02
SMIM3-201ENST00000526627 PLCB3Q01970 1234 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms