RNA–Protein interactions for RNA: ENST00000526599.1

CHRNA10-203, Transcript of cholinergic receptor nicotinic alpha 10 subunit, humanhuman

TSL 1 (best)

Gene CHRNA10, Length 1,541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA10-203ENST00000526599 TRAPPC3O43617 180 aa20.51■□□□□ 0.87
CHRNA10-203ENST00000526599 SERPING1P05155 500 aa20.51■□□□□ 0.87
CHRNA10-203ENST00000526599 BMP1P13497 986 aa20.51■□□□□ 0.87
CHRNA10-203ENST00000526599 P4HA1P13674 534 aa20.51■□□□□ 0.87
CHRNA10-203ENST00000526599 KLRC2P26717 231 aa20.51■□□□□ 0.87
CHRNA10-203ENST00000526599 USP8P40818 1118 aa20.51■□□□□ 0.87
CHRNA10-203ENST00000526599 KLHL30Q0D2K2 578 aa20.51■□□□□ 0.87
CHRNA10-203ENST00000526599 HGSNATQ68CP4 663 aa20.51■□□□□ 0.87
CHRNA10-203ENST00000526599 TMEM184AQ6ZMB5 413 aa20.51■□□□□ 0.87
CHRNA10-203ENST00000526599 RXFP1Q9HBX9 757 aa20.51■□□□□ 0.87
CHRNA10-203ENST00000526599 PYCARDQ9ULZ3 195 aa20.51■□□□□ 0.87
CHRNA10-203ENST00000526599 POLIQ9UNA4 740 aa20.51■□□□□ 0.87
CHRNA10-203ENST00000526599 TCF20Q9UGU0 1960 aaKnown RBP20.5■□□□□ 0.87
CHRNA10-203ENST00000526599 CCDC172P0C7W6 258 aa20.5■□□□□ 0.87
CHRNA10-203ENST00000526599 PNPLA4P41247 253 aa20.5■□□□□ 0.87
CHRNA10-203ENST00000526599 ASPAP45381 313 aa20.5■□□□□ 0.87
CHRNA10-203ENST00000526599 TDRD12Q587J7 1177 aaKnown RBP20.5■□□□□ 0.87
CHRNA10-203ENST00000526599 SCARA5Q6ZMJ2 495 aa20.5■□□□□ 0.87
CHRNA10-203ENST00000526599 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.5■□□□□ 0.87
CHRNA10-203ENST00000526599 GPR65Q8IYL9 337 aa20.5■□□□□ 0.87
CHRNA10-203ENST00000526599 LNX1Q8TBB1 728 aaPredicted RBP20.5■□□□□ 0.87
CHRNA10-203ENST00000526599 SLC22A17Q8WUG5 538 aa20.5■□□□□ 0.87
CHRNA10-203ENST00000526599 ZNF560Q96MR9 790 aa20.5■□□□□ 0.87
CHRNA10-203ENST00000526599 ARHGAP20Q9P2F6 1191 aa20.5■□□□□ 0.87
CHRNA10-203ENST00000526599 PLEKP08567 350 aaPredicted RBP20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 KRT5P13647 590 aa20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 EPCAMP16422 314 aa20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 RPL17P18621 184 aaKnown RBP20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 ACO1P21399 889 aaKnown RBP20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 FGFR3P22607 806 aa20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 TKTP29401 623 aaKnown RBP20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 PRKCIP41743 596 aa20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 CLCN4P51793 760 aa20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 TNNC1P63316 161 aa20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 PTCRAQ6ISU1 281 aaPredicted RBP20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 GLYCTKQ8IVS8 523 aa20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 PIK3R5Q8WYR1 880 aa20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 BCO2Q9BYV7 579 aa20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 NHEJ1Q9H9Q4 299 aaPredicted RBP20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 CD207Q9UJ71 328 aa20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 BZW2Q9Y6E2 419 aaKnown RBP20.49■□□□□ 0.87
CHRNA10-203ENST00000526599 ADH1AP07327 375 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 WEE2P0C1S8 567 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 SRGAP2BP0DMP2 458 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 EIF4A3P38919 411 aaKnown RBP20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 TAF6P49848 677 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 MTF1Q14872 753 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 PSMD5Q16401 504 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 ANKRD54Q6NXT1 300 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 RAD9BQ6WBX8 426 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 UBR7Q8N806 425 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 CASP10Q92851 521 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 HAUS4Q9H6D7 363 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 FNIP2Q9P278 1114 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 PCDHB4Q9Y5E5 795 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 SSU72P8A0A1W2PR75 194 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 CYP26A1O43174 497 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 YWHAEP62258 255 aaKnown RBP20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 MAPK8IP2Q13387 824 aaPredicted RBP20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 PALB2Q86YC2 1186 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 CCDC170Q8IYT3 715 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 CCDC42Q96M95 316 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 MMS19Q96T76 1030 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 CLSTN3Q9BQT9 956 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 APOL5Q9BWW9 433 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 SMYD3Q9H7B4 428 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 CYP3A43Q9HB55 503 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 CISHQ9NSE2 258 aa20.48■□□□□ 0.87
CHRNA10-203ENST00000526599 GRXCR2A6NFK2 248 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 IL9P15248 144 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 CD58P19256 250 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 CLCN1P35523 988 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 RAP1GAPP47736 663 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 PLXNA3P51805 1871 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 LILRA4P59901 499 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 PTK2Q05397 1052 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 SV2CQ496J9 727 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 SYCE2Q6PIF2 218 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 TMEM270Q6UE05 265 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 ZSCAN30Q86W11 494 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 SMRP1Q8NCR6 262 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 SUSD3Q96L08 255 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 DEF6Q9H4E7 631 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 CNTN6Q9UQ52 1028 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 SNX9Q9Y5X1 595 aa20.47■□□□□ 0.87
CHRNA10-203ENST00000526599 KPNA7A9QM74 516 aa20.46■□□□□ 0.87
CHRNA10-203ENST00000526599 SPTLC1O15269 473 aa20.46■□□□□ 0.87
CHRNA10-203ENST00000526599 MBTPS2O43462 519 aa20.46■□□□□ 0.87
CHRNA10-203ENST00000526599 CYLC1P35663 651 aaPredicted RBP20.46■□□□□ 0.87
CHRNA10-203ENST00000526599 CDH8P55286 799 aa20.46■□□□□ 0.87
CHRNA10-203ENST00000526599 CREMQ03060 361 aa20.46■□□□□ 0.87
CHRNA10-203ENST00000526599 PUS10Q3MIT2 529 aaKnown RBP20.46■□□□□ 0.87
CHRNA10-203ENST00000526599 SMYD5Q6GMV2 418 aa20.46■□□□□ 0.87
CHRNA10-203ENST00000526599 ZNF571Q7Z3V5 609 aaPredicted RBP20.46■□□□□ 0.87
CHRNA10-203ENST00000526599 SDCBP2Q9H190 292 aa20.46■□□□□ 0.87
CHRNA10-203ENST00000526599 GDAP2Q9NXN4 497 aa20.46■□□□□ 0.87
CHRNA10-203ENST00000526599 EPN1Q9Y6I3 576 aaPredicted RBP20.46■□□□□ 0.87
CHRNA10-203ENST00000526599 SYN3O14994 580 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms