RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 PPP4R3AQ6IN85 833 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 ZNF804AQ7Z570 1209 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 PDSS2Q86YH6 399 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 JADE3Q92613 823 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 KAT5Q92993 513 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 ASB2Q96Q27 587 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 MACROD1Q9BQ69 325 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 SLKQ9H2G2 1235 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 SLAMF7Q9NQ25 335 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 MAN1C1Q9NR34 630 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 IPPQ9Y573 584 aa3.68□□□□□ -1.82
ECHDC1-219ENST00000526299 CCDC154A6NI56 674 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 KIF20AO95235 890 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 GNAI3P08754 354 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 ENGP17813 658 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 MALP21145 153 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 EDNRBP24530 442 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 SMARCA1P28370 1054 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 CYP2C19P33261 490 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 LIPAP38571 399 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 MASP1P48740 699 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 GNAI1P63096 354 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 C3orf36Q3SXR2 165 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 TREML2Q5T2D2 321 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 ZNF618Q5T7W0 954 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 SHC4Q6S5L8 630 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 WDR53Q7Z5U6 358 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 DTX2Q86UW9 622 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 SPATS2Q86XZ4 545 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 FAM109AQ8N4B1 249 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 ACRBPQ8NEB7 543 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 ZC3H10Q96K80 434 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 CNPPD1Q9BV87 410 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 KLHL13Q9P2N7 655 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 AGAP1Q9UPQ3 857 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 WDR17Q8IZU2 1322 aa3.67□□□□□ -1.82
ECHDC1-219ENST00000526299 NOTCH4Q99466 2003 aa3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 PRSS29PA6NIE9 313 aa3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 RPLP2P05387 115 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 C5AR1P21730 350 aa3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 CNGA1P29973 690 aa3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 GCLCP48506 637 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 SP2Q02086 613 aa3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 TEDDM1Q5T9Z0 273 aa3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 RNF219Q5W0B1 726 aaPredicted RBP3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 MAVSQ7Z434 540 aa3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 MRPL10Q7Z7H8 261 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 CYP2W1Q8TAV3 490 aa3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 NELL2Q99435 816 aa3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 DUSP22Q9NRW4 184 aa3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 GNL3LQ9NVN8 582 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 SIDT1Q9NXL6 827 aaKnown RBP3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 CFAP97Q9P2B7 532 aa3.66□□□□□ -1.82
ECHDC1-219ENST00000526299 TRIM75PA6NK02 468 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 SLC16A3O15427 465 aaKnown RBP3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 TLR5O60602 858 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 CHEK2O96017 543 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 FGBP02675 491 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 ALPLP05186 524 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 SCP2P22307 547 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 THBS3P49746 956 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 TOB1P50616 345 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 CLCN2P51788 898 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 TMEM108Q6UXF1 575 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 USP37Q86T82 979 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 LRRC71Q8N4P6 559 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 ATL2Q8NHH9 583 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 VCPIP1Q96JH7 1222 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 RITA1Q96K30 269 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 SIK2Q9H0K1 926 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 GPR35Q9HC97 309 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 MKS1Q9NXB0 559 aa3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 CCNL1Q9UK58 526 aaPredicted RBP3.65□□□□□ -1.83
ECHDC1-219ENST00000526299 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 KLHL33A6NCF5 533 aa3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 FAM90A10PA6NDY2 464 aa3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 ADAM10O14672 748 aa3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 IL6RP08887 468 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 ATP5F1P24539 256 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 IL1R2P27930 398 aa3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 NANOS2P60321 138 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 KIF23Q02241 960 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 BOP1Q14137 746 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 TRIM71Q2Q1W2 868 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 ICE2Q659A1 982 aa3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 SLC4A10Q6U841 1118 aa3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 TRIM72Q6ZMU5 477 aa3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 PARS2Q7L3T8 475 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 TTC7BQ86TV6 843 aa3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 RBMXL3Q8N7X1 1067 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 C16orf52Q8NHV5 167 aa3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 PIGOQ8TEQ8 1089 aa3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 COA7Q96BR5 231 aa3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 PPP1R10Q96QC0 940 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 C1orf43Q9BWL3 253 aa3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 VPS33BQ9H267 617 aa3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 RLIMQ9NVW2 624 aa3.64□□□□□ -1.83
ECHDC1-219ENST00000526299 SERTAD3Q9UJW9 196 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms